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Vgll1 Gene Detail
Summary
  • Symbol
    Vgll1
  • Name
    vestigial like family member 1
  • Synonyms
    Tondu
  • Feature Type
    protein coding gene
  • IDs
    MGI:2655768
    NCBI Gene: 170828
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:56133466-56151900 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 30.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2655768
 protein coding gene ChrX:56133466-56151900 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035745
 protein coding gene ChrX:52405440-52425742 (+)
A/J MGP_AJ_G0035728
 protein coding gene ChrX:52603969-52625599 (+)
AKR/J MGP_AKRJ_G0035648
 protein coding gene ChrX:54001395-54019869 (+)
BALB/cJ MGP_BALBcJ_G0035715
 protein coding gene ChrX:52054569-52073534 (+)
C3H/HeJ MGP_C3HHeJ_G0035417
 protein coding gene ChrX:52932904-52953096 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036244
 protein coding gene ChrX:53790862-53811630 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033095
 protein coding gene ChrX:52010097-52027693 (+)
CAST/EiJ MGP_CASTEiJ_G0034710
 protein coding gene ChrX:38832987-38851962 (+)
CBA/J MGP_CBAJ_G0035392
 protein coding gene ChrX:55368128-55389314 (+)
DBA/2J MGP_DBA2J_G0035546
 protein coding gene ChrX:52179926-52198820 (+)
FVB/NJ MGP_FVBNJ_G0035496
 protein coding gene ChrX:51779633-51797899 (+)
LP/J MGP_LPJ_G0035634
 protein coding gene ChrX:52990935-53011025 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035532
 protein coding gene ChrX:56920225-56943383 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036260
 protein coding gene ChrX:52437675-52455964 (+)
PWK/PhJ MGP_PWKPhJ_G0034406
 protein coding gene ChrX:37101895-37120685 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034250
 protein coding gene ChrX:39565619-39586623 (+)
WSB/EiJ MGP_WSBEiJ_G0034853
 protein coding gene ChrX:51968245-51991297 (+)



Homology
more
  • Human Ortholog
    VGLL1, vestigial like family member 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    VGLL1, vestigial like family member 1
  • Synonyms
    TDU, VGL1
  • Links
    NCBI Gene ID: 51442
    neXtProt AC: NX_Q99990
    UniProt: Q99990

  • Chr Location
    Xq26.3; chrX:136532215-136556807 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    715
  • Tissues
    5
  • cDNA Data
    9
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 170828 NCBI Gene Model | MGI Sequence Detail 18435 C57BL/6J ±  kb
transcript NM_001313763 RefSeq | MGI Sequence Detail 2297 C57BL/6  
polypeptide Q99NC0 UniProt | EBI | MGI Sequence Detail 307 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 9
    Primer pair 2

    Microarray probesets 2
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:306471 Niki Y, et al., Expression pattern of transcriptional enhanced associate domain family member 1 (Tead1) in developing mouse molar tooth. Gene Expr Patterns. 2021 Jun;40:119182
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory