Rbm28
Gene Detail

Symbol Name ID

Rbm28 RNA binding motif protein 28 MGI:2655711

Synonyms

2810480G15Rik, MGC:12075, MGC:38664

Feature Type

protein coding gene

Genetic Map

Chromosome 6

12.33 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr6:29123573-29165006 bp, - strand From VEGA annotation of GRCm38   41434 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Rbm28 ± 2 cM)

Gene Tree: Rbm28

Human ortholog

RBM28 RNA binding motif protein 28 NCBI Gene ID 55131
Human Chr7:127950436-127983962 bp, - strand Reference GRCh37.p2 Primary Assembly
Human Diseases Associated with Human RBM28 (1)

Alleles and phenotypes

All alleles(13) : Targeted(2) Gene trapped(11)

Gene Ontology (GO) classifications

All GO classifications: (7 annotations)

Process	mRNA processing, RNA splicing
Component	nucleus, spliceosomal complex
Function	nucleic acid binding, nucleotide binding, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (22)    Tissues (22)    Images (4)
Theiler Stages: 21, 28

Assay Type	Results
RNA in situ	20
RT-PCR	2

cDNA source data(123)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(124) cDNA(123) Primer pair(1)
Microarray probesets(7)

Other database links

VEGA Gene Model	OTTMUSG00000035837 (Evidence)
Ensembl Gene Model	ENSMUSG00000029701 (Evidence)
Entrez Gene	68272 (Evidence)
UniGene	40802
DFCI	TC1575461, TC1596761, TC1601169, TC1617833
DoTS	DT.101389254, DT.524319
NIA Mouse Gene Index	U027108
PDB	1X4H
Consensus CDS Project	CCDS51733.1
International Mouse Knockout Project Status	Rbm28

Sequences

Length	Strain/Species
genomic	OTTMUSG00000035837	VEGA Gene Model | MGI Sequence Detail	41434	C57BL/6J
transcript	OTTMUST00000091787	VEGA | MGI Sequence Detail	4468	Not Applicable
polypeptide	OTTMUSP00000050588	VEGA | MGI Sequence Detail	750	Not Applicable

All sequences(52) RefSeq(3) UniProt(3)

Polymorphisms

SNPs(311 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR012677	Nucleotide-binding, alpha-beta plait
InterPro	IPR000504	RNA recognition motif domain
Protein Ontology	PR:000013793	RNA-binding protein 28

References

(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
All references(35)

Other accession IDs

MGI:2141434