About   Help   FAQ
Rbm28
Gene Detail
 Symbol
Name
ID
Rbm28
RNA binding motif protein 28
MGI:2655711
Synonyms 2810480G15Rik, MGC:12075, MGC:38664
Feature Type protein coding gene
Genetic Map
Chromosome 6
12.33 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr6:29123573-29165006 bp, - strand
From VEGA annotation of GRCm38

  41434 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:7117  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 zebrafish

Gene Tree: Rbm28

Human
homologs
Human Homolog RBM28, RNA binding motif protein 28
NCBI Gene ID 55131
neXtProt AC  NX_Q9NW13
Human Chr (Location)  7q32.1; chr7:128310376-128343908 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RBM28
Alleles
and
phenotypes
All alleles(13) : Targeted(2) Gene trapped(11)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process mRNA processing, RNA splicing
Component nucleolus, nucleus, ...
Function nucleic acid binding, nucleotide binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (22)    Tissues (22)    Images (4)
Theiler Stages: 21, 28
Assay TypeResults
RNA in situ 20
RT-PCR 2
cDNA source data(122)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(123) cDNA(122) Primer pair(1)
Microarray probesets(7)
Other database
links
VEGA Gene ModelOTTMUSG00000035837 (Evidence)
Ensembl Gene ModelENSMUSG00000029701 (Evidence)
Entrez Gene68272 (Evidence)
UniGene40802
DFCITC1575461, TC1596761, TC1601169, TC1617833
DoTSDT.524319, DT.101389254
NIA Mouse Gene IndexU027108
PDB1X4H
Consensus CDS ProjectCCDS51733.1
International Mouse Knockout Project StatusRbm28
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000035837 VEGA Gene Model | MGI Sequence Detail 41434 C57BL/6J ±  kb
transcript OTTMUST00000091787 VEGA | MGI Sequence Detail 4468 Not Applicable 
polypeptide OTTMUSP00000050588 VEGA | MGI Sequence Detail 750 Not Applicable 

For the selected sequences
All sequences(56) RefSeq(7) UniProt(3)
Polymorphisms SNPs within 2kb(468 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012677 Nucleotide-binding, alpha-beta plait
InterPro IPR000504 RNA recognition motif domain
Protein Ontology PR:000013793 RNA-binding protein 28
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:193822 Lumayag S, et al., Inactivation of the microRNA-183/96/182 cluster results in syndromic retinal degeneration. Proc Natl Acad Sci U S A. 2013 Feb 5;110(6):E507-16
All references(37)
Other
accession IDs
MGI:2141434

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/08/2014
MGI 5.17
The Jackson Laboratory