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Akr1c19 Gene Detail
Summary
  • Symbol
    Akr1c19
  • Name
    aldo-keto reductase family 1, member C19
  • Synonyms
    1810010N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2653678
    NCBI Gene: 432720
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:4233503-4248361 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 2.36 cM
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    205 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2653678
 protein coding gene Chr13:4228700-4252843 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020205
 protein coding gene Chr13:721087-741117 (+)
A/J MGP_AJ_G0020161
 protein coding gene Chr13:812169-832140 (+)
AKR/J MGP_AKRJ_G0020136
 protein coding gene Chr13:830471-850464 (+)
BALB/cJ MGP_BALBcJ_G0020144
 protein coding gene Chr13:810960-831212 (+)
C3H/HeJ MGP_C3HHeJ_G0019948
 protein coding gene Chr13:902751-922607 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020591
 protein coding gene Chr13:793126-813028 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018203
 protein coding gene Chr13:706846-727142 (+)
CAST/EiJ MGP_CASTEiJ_G0019488
 protein coding gene Chr13:733353-756517 (+)
CBA/J MGP_CBAJ_G0019915
 protein coding gene Chr13:803405-823104 (+)
DBA/2J MGP_DBA2J_G0020032
 protein coding gene Chr13:727187-749647 (+)
FVB/NJ MGP_FVBNJ_G0020017
 protein coding gene Chr13:692190-712159 (+)
LP/J MGP_LPJ_G0020106
 protein coding gene Chr13:797117-819986 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020053
 protein coding gene Chr13:860433-884172 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020619
 protein coding gene Chr13:787035-809361 (+)
PWK/PhJ MGP_PWKPhJ_G0019249
 protein coding gene Chr13:793463-814451 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019055
 protein coding gene Chr13:830160-850489 (+)
WSB/EiJ MGP_WSBEiJ_G0019546
 protein coding gene Chr13:734282-755618 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    12
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 432720 NCBI Gene Model | MGI Sequence Detail 14859 C57BL/6J ±  kb
transcript NM_001013785 RefSeq | MGI Sequence Detail 1242 C57BL/6  
polypeptide NP_001013807 RefSeq | MGI Sequence Detail 323 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR020471 Aldo/keto reductase
    IPR018170 Aldo/keto reductase, conserved site
    IPR023210 NADP-dependent oxidoreductase domain
    IPR036812 NADP-dependent oxidoreductase domain superfamily
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1923599
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/13/2020
MGI 6.16 		The Jackson Laboratory