Akr1c19 Gene Detail

Summary

• Symbol
  Akr1c19
• Name
  aldo-keto reductase family 1, member C19
• Synonyms
  1810010N06Rik

• Feature Type
  protein coding gene
• IDs
  MGI:2653678
  NCBI Gene: 432720
• Alliance
  gene page

Location & Maps

• Sequence Map
  Chr13:4228700-4248681 bp, + strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    19982 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 2.36 cM
• Mapping Data
  4 experiments

Homology

• HomoloGene
  Vertebrate Homology Class 134145
  1 mouse;1 rat
  
• Protein SuperFamily
  AKR
• Gene Tree
  Akr1c19
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  14 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  12
• Literature Summary
  1

• Other Mouse Links
  GEO
  Expression Atlas

Interactions

• Akr1c19 interacts with 44 markers (Mir7-2, Mir7b, Mir18, ...) View All

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  3
• UniProt
  3
• CCDS
  CCDS26221.1
• UniGene
  22832

• VEGA
  OTTMUSG00000027684 (Evidence)
• Ensembl
  ENSMUSG00000071551 (Evidence)
• NCBI Gene
  432720

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000027684	VEGA Gene Model | MGI Sequence Detail	19982	C57BL/6J
transcript	OTTMUST00000068497	VEGA | MGI Sequence Detail	1349	Not Applicable
polypeptide	OTTMUSP00000034651	VEGA | MGI Sequence Detail	323	Not Applicable

Polymorphisms

• SNPs within 2kb
  251 from dbSNP Build 142

Protein
Information

• UniProt
  3 Sequences
• InterPro Domains
  IPR020471 Aldo/keto reductase
  IPR018170 Aldo/keto reductase, conserved site
  IPR023210 NADP-dependent oxidoreductase domain
  IPR036812 NADP-dependent oxidoreductase domain superfamily

Molecular
Reagents

• All nucleic 13

  cDNA 12

  Primer pair 1

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:1923599

References

• Summaries
  All 19

  Developmental Gene Expression 1

  Phenotypes 1
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:171730 Ogaki S, et al., An expression profile analysis of ES cell-derived definitive endodermal cells and Pdx1-expressing cells. BMC Dev Biol. 2011;11:13