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Atp6v1g3 Gene Detail
Summary
  • Symbol
    Atp6v1g3
  • Name
    ATPase, H+ transporting, lysosomal V1 subunit G3
  • Feature Type
    protein coding gene
  • IDs
    MGI:2450548
    NCBI Gene: 338375
  • Gene Overview
    MyGene.info: ATP6V1G3
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:138273738-138289462 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 60.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    226 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2450548
protein coding gene Chr1:138273738-138289462 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016546
protein coding gene Chr1:142300893-142316617 (+)
A/J MGP_AJ_G0016529
protein coding gene Chr1:136786129-136801856 (+)
AKR/J MGP_AKRJ_G0016494
protein coding gene Chr1:140903102-140918824 (+)
BALB/cJ MGP_BALBcJ_G0016489
protein coding gene Chr1:137122079-137137803 (+)
C3H/HeJ MGP_C3HHeJ_G0016315
protein coding gene Chr1:141000276-141016003 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016950
protein coding gene Chr1:147302977-147318701 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014661
protein coding gene Chr1:129832189-129847871 (+)
CAST/EiJ MGP_CASTEiJ_G0015895
protein coding gene Chr1:140158658-140174396 (+)
CBA/J MGP_CBAJ_G0016288
protein coding gene Chr1:152390707-152406434 (+)
DBA/2J MGP_DBA2J_G0016394
protein coding gene Chr1:135775205-135790929 (+)
FVB/NJ MGP_FVBNJ_G0016393
protein coding gene Chr1:134429049-134444772 (+)
LP/J MGP_LPJ_G0016465
protein coding gene Chr1:143402680-143418404 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016418
protein coding gene Chr1:158052721-158068444 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016986
protein coding gene Chr1:140678869-140694593 (+)
PWK/PhJ MGP_PWKPhJ_G0015681
protein coding gene Chr1:134864278-134880184 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015468
protein coding gene Chr1:139641262-139657431 (+)
WSB/EiJ MGP_WSBEiJ_G0015958
protein coding gene Chr1:140701551-140717276 (+)



Homology
more
  • Human Ortholog
    ATP6V1G3, ATPase H+ transporting V1 subunit G3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ATP6V1G3, ATPase H+ transporting V1 subunit G3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATP6G3, Vma10
  • Links
    NCBI Gene ID: 127124
    neXtProt AC: NX_Q96LB4
    UniProt: Q96LB4

  • Chr Location
    1q31.3; chr1:198523222-198540945 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 338375 NCBI Gene Model | MGI Sequence Detail 15725 C57BL/6J ±  kb
transcript NM_177397 RefSeq | MGI Sequence Detail 1887 C57BL/6  
polypeptide Q8BMC1 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 9
    Primer pair 2

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Developmental Gene Expression 4
    Gene Ontology 6
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:226028 Lewandowski JP, et al., Spatiotemporal regulation of GLI target genes in the mammalian limb bud. Dev Biol. 2015 Oct 1;406(1):92-103

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory