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D130020L05Rik Gene Detail
Summary
  • Symbol
    D130020L05Rik
  • Name
    RIKEN cDNA D130020L05 gene
  • Synonyms
    9430007L23Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2450270
    NCBI Gene: 319760
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:101082451-101088927 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 51.19 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    55 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2450270
lncRNA gene Chr12:101082451-101088927 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005390
lincRNA gene Chr12:102587420-102596379 (+)
A/J MGP_AJ_G0005373
lincRNA gene Chr12:98715393-98721834 (+)
AKR/J MGP_AKRJ_G0005353
lincRNA gene Chr12:101411634-101417876 (+)
BALB/cJ MGP_BALBcJ_G0005355
lincRNA gene Chr12:99075253-99081490 (+)
C3H/HeJ MGP_C3HHeJ_G0005304
lincRNA gene Chr12:101944269-101951381 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005509
lincRNA gene Chr12:105747920-105756424 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004894
lincRNA gene Chr12:95702879-95709190 (+)
CAST/EiJ MGP_CASTEiJ_G0005248
lincRNA gene Chr12:97073243-97079528 (+)
CBA/J MGP_CBAJ_G0005293
lincRNA gene Chr12:109671654-109677897 (+)
DBA/2J MGP_DBA2J_G0005310
lincRNA gene Chr12:98169693-98175932 (+)
FVB/NJ MGP_FVBNJ_G0005336
lincRNA gene Chr12:96890200-96896438 (+)
LP/J MGP_LPJ_G0005392
lincRNA gene Chr12:102432606-102438844 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005318
lincRNA gene Chr12:113238739-113244988 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005510
lincRNA gene Chr12:100987728-100993967 (+)
PWK/PhJ MGP_PWKPhJ_G0005197
lincRNA gene Chr12:92814399-92820908 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005118
lincRNA gene Chr12:95171322-95181174 (+)
WSB/EiJ MGP_WSBEiJ_G0005298
lincRNA gene Chr12:101853564-101862019 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 319760 NCBI Gene Model | MGI Sequence Detail 6477 C57BL/6J ±  kb
transcript NR_038050 RefSeq | MGI Sequence Detail 2935 C57BL/6  
polypeptide Q8C2V0 UniProt | EBI | MGI Sequence Detail 178 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
Other
Accession IDs
less
MGI:2442679
References
more
  • Summaries
    All 17
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory