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Cdv3 Gene Detail
Summary
  • Symbol
    Cdv3
  • Name
    carnitine deficiency-associated gene expressed in ventricle 3
  • Synonyms
    2510010F10Rik, C230084J24Rik, TPP36
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448759
    NCBI Gene: 321022
Location & Maps
more
  • Sequence Map
    Chr9:103353094-103365840 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      12747 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 55.26 cM
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    CDV3, CDV3 homolog
  • Vertebrate Orthologs
    11
  • Human Ortholog
    CDV3, CDV3 homolog
    Orthology source: HomoloGene, HGNC
  • Synonyms
    H41
  • Links
    NCBI Gene ID: 55573
    neXtProt AC: NX_Q9UKY7

  • Chr Location
    3q22.1; chr3:133573590-133590274 (+)  GRCh38.p2
  • HomoloGene
    Vertebrate Homology Class 133862
    1 human;2 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: CDV3
  • Gene Tree
    Cdv3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    43
  • Gene trapped
    41
  • Targeted
    2
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    15
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048458 VEGA Gene Model | MGI Sequence Detail 12747 C57BL/6J ±  kb
transcript OTTMUST00000124208 VEGA | MGI Sequence Detail 3387 Not Applicable  
polypeptide OTTMUSP00000067626 VEGA | MGI Sequence Detail 281 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    60 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 15
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGI:1924257, MGI:2143404
References
more
  • Summaries
    All 31
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/27/2016
MGI 6.05 		The Jackson Laboratory