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Pip5kl1
Gene Detail
 Symbol
Name
ID
Pip5kl1
phosphatidylinositol-4-phosphate 5-kinase-like 1
MGI:2448520
Feature Type protein coding gene
Genetic Map
Chromosome 2
22.09 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:32574797-32583782 bp, + strand
From VEGA annotation of GRCm38

  8986 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:45457  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: phosphatidylinositol-4-phosphate 5-kinase type II alpha
Gene Tree: Pip5kl1

Human
homologs
Human Homolog PIP5KL1, phosphatidylinositol-4-phosphate 5-kinase-like 1
NCBI Gene ID 138429
neXtProt AC  NX_Q5T9C9
Human Synonyms  bA203J24.5, PIPKH
Human Chr (Location)  9q34.11; chr9:127920886-127931001 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pip5kl1 interacts with 76 markers (Mir1b, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (13 annotations)
Process phosphatidylinositol metabolic process, phosphatidylinositol phosphorylation, ...
Component cell projection, cytoplasm, ...
Function 1-phosphatidylinositol-4-phosphate 5-kinase activity, ATP binding, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (94)    Tissues (94)    Images (4)
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(7) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000011983 (Evidence)
Ensembl Gene ModelENSMUSG00000046854 (Evidence)
Entrez Gene227733 (Evidence)
UniGene78923
DFCITC1583838
DoTSDT.101177399, DT.101242825, DT.101721339, DT.55255111
NIA Mouse Gene IndexU048790
EC2.7.1.68
Consensus CDS ProjectCCDS15920.1
International Mouse Knockout Project StatusPip5kl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011983 VEGA Gene Model | MGI Sequence Detail 8986 C57BL/6J ±  kb
transcript OTTMUST00000028354 VEGA | MGI Sequence Detail 1577 Not Applicable 
polypeptide OTTMUSP00000012842 VEGA | MGI Sequence Detail 395 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(8) UniProt(1)
Polymorphisms SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023610 Phosphatidylinositol-4-phosphate 5-kinase
InterPro IPR002498 Phosphatidylinositol-4-phosphate 5-kinase, core
InterPro IPR027483 Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
InterPro IPR027484 Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
Protein Ontology PR:000012748 phosphatidylinositol 4-phosphate 5-kinase-like protein 1
References (Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(32)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory