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Pip5kl1
Gene Detail
Symbol

Name
ID
Pip5kl1
phosphatidylinositol-4-phosphate 5-kinase-like 1
MGI:2448520
Feature Type
protein coding gene
Genetic Map
Chromosome 2
22.09 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:32574797-32583782 bp, + strand
From VEGA annotation of GRCm38

  8986 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:45457  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

HCOP human homology predictions: PIP5KL1
Protein SuperFamily: phosphatidylinositol-4-phosphate 5-kinase type II alpha
Gene Tree: Pip5kl1

Human
homologs
PIP5KL1, phosphatidylinositol-4-phosphate 5-kinase-like 1
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 138429
neXtProt AC: NX_Q5T9C9

Human Synonyms: bA203J24.5, PIPKH

Human Chr (Location): 9q34.11; chr9:127921529-127930797 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pip5kl1 interacts with 75 markers (Mir1b, Mir17, Mir20b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (94)    Tissues (94)    Images (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase pip5kl1    NEW 
Molecular
reagents
All nucleic(8) cDNA(7) Primer pair(1)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000011983 (Evidence)
Ensembl Gene Model ENSMUSG00000046854 (Evidence)
Entrez Gene 227733 (Evidence)
UniGene 78923
DFCI TC1583838
DoTS DT.101721339, DT.101242825, DT.101177399, DT.55255111
NIA Mouse Gene Index U048790
EC 2.7.1.68
Consensus CDS Project CCDS15920.1
International Mouse Phenotyping Consortium Status Pip5kl1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000011983 VEGA Gene Model | MGI Sequence Detail 8986 C57BL/6J ±  kb
transcript OTTMUST00000028354 VEGA | MGI Sequence Detail 1577 Not Applicable 
polypeptide OTTMUSP00000012842 VEGA | MGI Sequence Detail 395 Not Applicable 

For the selected sequences
All sequences(40) RefSeq(8) UniProt(1)
Polymorphisms
SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023610 Phosphatidylinositol-4-phosphate 5-kinase
InterPro IPR002498 Phosphatidylinositol-4-phosphate 5-kinase, core
InterPro IPR027483 Phosphatidylinositol-4-phosphate 5-kinase, C-terminal
InterPro IPR027484 Phosphatidylinositol-4-phosphate 5-kinase, N-terminal domain
Protein Ontology PR:000012748 phosphatidylinositol 4-phosphate 5-kinase-like protein 1
References
(Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(31)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory