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Slc35e3
Gene Detail
Symbol

Name
ID
Slc35e3
solute carrier family 35, member E3
MGI:2448489
Synonyms
9330166G04Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 10
66.32 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr10:117733679-117746358 bp, - strand
From Ensembl annotation of GRCm38

  12680 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:41279  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

HCOP human homology predictions: SLC35E3
Gene Tree: Slc35e3

Human
homologs
SLC35E3, solute carrier family 35, member E3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55508
neXtProt AC: NX_Q7Z769

Human Synonyms: BLOV1

Human Chr (Location): 12q15; chr12:68746148-68766073 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc35e3 interacts with 189 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (152)    Tissues (31)    Images (23)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 152
cDNA source data(34)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: GEISHA SLC35E3 ; Xenbase slc35e3    NEW 
Molecular
reagents
All nucleic(35) cDNA(34) Primer pair(1)
Microarray probesets(4)
Other database
links
Ensembl Gene Model ENSMUSG00000060181 (Evidence)
Entrez Gene 215436 (Evidence)
UniGene 256753
DFCI TC1580252
DoTS DT.526859, DT.94255412, DT.97363656
NIA Mouse Gene Index U106834, U163231, U290433
Consensus CDS Project CCDS24195.1
International Mouse Phenotyping Consortium Status Slc35e3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060181 Ensembl Gene Model | MGI Sequence Detail 12680 C57BL/6J ±  kb
transcript ENSMUST00000079041 Ensembl | MGI Sequence Detail 3482 Not Applicable 
polypeptide ENSMUSP00000078050 Ensembl | MGI Sequence Detail 313 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(3)
Polymorphisms
SNPs within 2kb(140 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004853 Domain of unknown function DUF250
Protein Ontology PR:000015103 solute carrier family 35 member E3
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:1924455, MGI:2143627

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory