Fchsd2
Gene Detail

Symbol

Name
ID

Fchsd2
FCH and double SH3 domains 2
MGI:2448475

Synonyms

mKIAA0769, Sh3md3

Feature Type

protein coding gene

Genetic Map

Chromosome 7
54.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr7:101108775-101284405 bp, + strand From VEGA annotation of GRCm38   175631 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:8887  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: Fchsd2

Human
homologs

Human Homolog		FCHSD2, FCH and double SH3 domains 2
NCBI Gene ID		9873
neXtProt AC		NX_O94868
Human Synonyms		NWK, SH3MD3
Human Chr (Location)		11q13.4; chr11:72836745-73142098 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(8) : Gene trapped(6) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Fchsd2 interacts with 381 markers (Mir1a-1, Mir1a-2, Mir1b, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (3 annotations)

Process	biological_process
Component	cellular_component
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (2 records)

Data Summary: Results (20)    Tissues (2)    Images (16)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	20

cDNA source data(116)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(116) cDNA(116)
Microarray probesets(3)

Other database
links

VEGA Gene Model	OTTMUSG00000025163 (Evidence)
Ensembl Gene Model	ENSMUSG00000030691 (Evidence)
Entrez Gene	207278 (Evidence)
UniGene	263041
DFCI	TC1767214, TC1575481, TC1630600
DoTS	DT.101398958, DT.101219181, DT.87029160, DT.40134042, DT.101178492, DT.102556944, DT.101735504, DT.91445701
NIA Mouse Gene Index	U008466
Consensus CDS Project	CCDS52327.1, CCDS52328.1
International Mouse Knockout Project Status	Fchsd2

Sequences

Length	Strain/Species
genomic	OTTMUSG00000025163	VEGA Gene Model | MGI Sequence Detail	175631	C57BL/6J
transcript	OTTMUST00000061906	VEGA | MGI Sequence Detail	4405	Not Applicable
polypeptide	OTTMUSP00000030460	VEGA | MGI Sequence Detail	764	Not Applicable

All sequences(59) RefSeq(8) UniProt(3)

Polymorphisms

SNPs within 2kb(723 from dbSNP Build 137)

Protein-related
information

Resource	ID	Description
InterPro	IPR001060	FCH domain
InterPro	IPR001452	Src homology-3 domain
Protein Ontology	PR:000030866	FCH and double SH3 domains protein 2

References

(Earliest) J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(32)

Other
accession IDs

MGI:2142383