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Fchsd2
Gene Detail
Symbol

Name
ID
Fchsd2
FCH and double SH3 domains 2
MGI:2448475
Synonyms
mKIAA0769, Sh3md3
Feature Type
protein coding gene
Genetic Map
Chromosome 7
54.50 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:101108775-101284405 bp, + strand
From VEGA annotation of GRCm38

  175631 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8887  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: FCHSD2
Gene Tree: Fchsd2

Human
homologs
FCHSD2, FCH and double SH3 domains 2
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9873
neXtProt AC: NX_O94868

Human Synonyms: NWK, SH3MD3

Human Chr (Location): 11q13.4; chr11:72836743-73142454 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(8) : Gene trapped(6) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Fchsd2 interacts with 380 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (20)    Tissues (2)    Images (16)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 20
cDNA source data(116)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase fchsd2    NEW 
Molecular
reagents
All nucleic(116) cDNA(116)
Microarray probesets(3)
Other database
links
VEGA Gene Model OTTMUSG00000025163 (Evidence)
Ensembl Gene Model ENSMUSG00000030691 (Evidence)
Entrez Gene 207278 (Evidence)
UniGene 263041
DFCI TC1575481, TC1630600, TC1767214
DoTS DT.101178492, DT.101219181, DT.101398958, DT.101735504, DT.102556944, DT.40134042, DT.87029160, DT.91445701
NIA Mouse Gene Index U008466
Consensus CDS Project CCDS52327.1, CCDS52328.1
International Mouse Phenotyping Consortium Status Fchsd2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025163 VEGA Gene Model | MGI Sequence Detail 175631 C57BL/6J ±  kb
transcript OTTMUST00000061906 VEGA | MGI Sequence Detail 4405 Not Applicable 
polypeptide OTTMUSP00000030460 VEGA | MGI Sequence Detail 764 Not Applicable 

For the selected sequences
All sequences(58) RefSeq(8) UniProt(2)
Polymorphisms
SNPs within 2kb(723 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR031160 F-BAR domain
InterPro IPR001060 FCH domain
InterPro IPR001452 SH3 domain
Protein Ontology PR:000030866 FCH and double SH3 domains protein 2
References
(Earliest) J:83413 Okazaki N, et al., Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. DNA Res. 2003 Feb 28;10(1):35-48
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(30)
Other
accession IDs
MGI:2142383

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory