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Hist1h2bp
Gene Detail
Symbol

Name
ID
Member of
Hist1h2bp
histone cluster 1, H2bp
MGI:2448409
Hist1 cluster
Feature Type
protein coding gene
Genetic Map
Chromosome 13
7.97 cM, cytoband A2-A3
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr13:21787461-21789213 bp, + strand
From VEGA annotation of GRCm38

  1753 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:134442  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 8 chicken; 1 zebrafish

Protein SuperFamily: histone H2B
Gene Tree: Hist1h2bp

Human
homologs
Human Homolog HIST1H2BO, histone cluster 1, H2bo
NCBI Gene ID 8348
neXtProt AC  NX_P23527
Human Synonyms  dJ193B12.2, H2B.2, H2BFN, H2B/n
Human Chr (Location)  6p22.1; chr6:27893425-27893891 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(6) Radiation induced(1)
Genomic Mutations involving Hist1h2bp (1)
Interactions
Hist1h2bp interacts with 34 markers (Mir27a, Mir27b, Mir30a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Component chromosome, nucleosome, ...
Function DNA binding, protein heterodimerization activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (31)    Tissues (8)    Images (6)    Tissue x Stage Matrix (view)
Assay TypeResults
Northern blot 31
cDNA source data(11)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) Genomic(1) cDNA(11) Other(2)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000000436 (Evidence)
Ensembl Gene ModelENSMUSG00000069308 (Evidence)
Entrez Gene319188 (Evidence)
UniGene264645
DoTSDT.60110593, DT.94150651
Consensus CDS ProjectCCDS26298.2
International Mouse Knockout Project StatusHist1h2bp
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000436 VEGA Gene Model | MGI Sequence Detail 1753 C57BL/6J ±  kb
transcript OTTMUST00000001017 VEGA | MGI Sequence Detail 621 Not Applicable 
polypeptide OTTMUSP00000000463 VEGA | MGI Sequence Detail 138 Not Applicable 

For the selected sequences
All sequences(28) RefSeq(6) UniProt(3)
Polymorphisms
SNPs within 2kb(26 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007125 Histone core
InterPro IPR009072 Histone-fold
InterPro IPR000558 Histone H2B
Protein Ontology PR:000008863 histone H2B type 1-P
References
(Earliest) J:34257 Moss SB, et al., Expression of a novel histone 2B during mouse spermiogenesis. Dev Biol. 1989 May;133(1):83-92
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory