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Hist1h2bp Gene Detail
Summary
  • Symbol
    Hist1h2bp
  • Name
    histone cluster 1, H2bp
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448409
    NCBI Gene: 319188
  • Member of
    Hist1 cluster
  • Gene Overview
    MyGene.info: HIST1H2BO
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:21787461-21789213 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 7.97 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    50 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448409
protein coding gene Chr13:21787461-21801561 (.)
129S1/SvImJ MGP_129S1SvImJ_G0020301
protein coding gene Chr13:19067214-19366760 (+)
A/J MGP_AJ_G0020256
protein coding gene Chr13:18645221-18646973 (+)
AKR/J MGP_AKRJ_G0020228
protein coding gene Chr13:18960721-18963061 (+)
BALB/cJ MGP_BALBcJ_G0020243
protein coding gene Chr13:18700639-18702391 (+)
C3H/HeJ MGP_C3HHeJ_G0020053
protein coding gene Chr13:19050112-19051864 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020684
protein coding gene Chr13:19745598-19750928 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019587
protein coding gene Chr13:19136758-19137400 (+)
CBA/J MGP_CBAJ_G0020007
protein coding gene Chr13:20420796-20422548 (+)
DBA/2J MGP_DBA2J_G0020130
protein coding gene Chr13:18275146-18276898 (+)
FVB/NJ MGP_FVBNJ_G0020116
protein coding gene Chr13:17935646-17937291 (+)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020148
protein coding gene Chr13:20811850-20813528 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020716
protein coding gene Chr13:18771458-18773210 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0019146
protein coding gene Chr13:17717053-17771039 (+)
WSB/EiJ MGP_WSBEiJ_G0019638
protein coding gene Chr13:18860009-18861867 (+)



Homology
more
  • Human Ortholog
    HIST1H2BO, histone cluster 1 H2B family member o
  • Vertebrate Orthologs
    16
  • Human Ortholog
    HIST1H2BO, histone cluster 1 H2B family member o
    Orthology source: HomoloGene
  • Synonyms
    dJ193B12.2, H2B.2, H2BFN, H2B/n
  • Links
    NCBI Gene ID: 8348
    neXtProt AC: NX_P23527
    UniProt: P23527

  • Chr Location
    6p22.1; chr6:27893425-27893891 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Gene trapped
    6
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Hist1h2bp
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000069308 Ensembl Gene Model | MGI Sequence Detail 1753 C57BL/6J ±  kb
transcript ENSMUST00000110473 Ensembl | MGI Sequence Detail 621 Not Applicable  
polypeptide ENSMUSP00000106099 Ensembl | MGI Sequence Detail 138 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    Genomic 1
    cDNA 12
    Other 2

    Microarray probesets 4
References
more
  • Summaries
    All 34
    Developmental Gene Expression 1
    Gene Ontology 5
    Phenotypes 11
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory