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H2bc6 Gene Detail
Summary
  • Symbol
    H2bc6
  • Name
    H2B clustered histone 6
  • Synonyms
    Hist1h2be
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448380
    NCBI Gene: 319179
  • Member of
    Hist1 cluster
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:23767653-23805107 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 9.81 cM, cytoband A2-A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    414 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448380
protein coding gene Chr13:23767653-23805107 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020353
protein coding gene Chr13:21009399-21053007 (-)
A/J MGP_AJ_G0020306
protein coding gene Chr13:20631252-20670345 (-)
AKR/J MGP_AKRJ_G0020284
protein coding gene Chr13:20875537-20922601 (-)
BALB/cJ MGP_BALBcJ_G0020301
protein coding gene Chr13:20627263-20668300 (-)
C3H/HeJ MGP_C3HHeJ_G0020106
protein coding gene Chr13:20949985-20990597 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020739
protein coding gene Chr13:21792853-21835142 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018325
protein coding gene Chr13:19424883-19461151 (-)
CAST/EiJ MGP_CASTEiJ_G0019623
protein coding gene Chr13:20637576-20677838 (-)
CBA/J MGP_CBAJ_G0020057
protein coding gene Chr13:22623038-22671853 (-)
DBA/2J MGP_DBA2J_G0020184
protein coding gene Chr13:20170291-20207428 (-)
FVB/NJ MGP_FVBNJ_G0020169
protein coding gene Chr13:19815039-19853396 (-)
LP/J MGP_LPJ_G0020257
protein coding gene Chr13:21331475-21369766 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020197
protein coding gene Chr13:22933803-22974023 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020778
protein coding gene Chr13:20730396-20775528 (-)
PWK/PhJ MGP_PWKPhJ_G0019378
protein coding gene Chr13:20197484-20233970 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0019682
protein coding gene Chr13:20866113-20907387 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    13
  • Chemically induced (other)
    1
  • Gene trapped
    9
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving H2bc6
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319179 NCBI Gene Model | MGI Sequence Detail 37455 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    Genomic 1
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 27
    Phenotypes 11
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/10/2022
MGI 6.19
The Jackson Laboratory