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Hist2h3c2 Gene Detail
Summary
  • Symbol
    Hist2h3c2
  • Name
    histone cluster 2, H3c2
  • Synonyms
    H3-614, Hist2h3c2-ps, Hist2h3ca1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448357
    NCBI Gene: 97114
  • Gene Overview
    MyGene.info: HIST1H3G
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:96238479-96239127 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 41.69 cM, cytoband F1-F2
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448357
protein coding gene Chr3:96238108-96239127 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0027576
protein coding gene Chr3:94034205-94034689 (+)
AKR/J MGP_AKRJ_G0027540
protein coding gene Chr3:96213559-96214246 (+)
BALB/cJ MGP_BALBcJ_G0027586
protein coding gene Chr3:93822708-93823351 (+)
C3H/HeJ MGP_C3HHeJ_G0027316
protein coding gene Chr3:96498363-96523140 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026771
protein coding gene Chr3:95836109-95837494 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0027436
protein coding gene Chr3:93335030-93336015 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0027540
protein coding gene Chr3:98367020-98367767 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    HIST1H3G, histone cluster 1 H3 family member g
  • Vertebrate Orthologs
    10
  • Human Ortholog
    HIST1H3G, histone cluster 1 H3 family member g
    Orthology source: HomoloGene
  • Synonyms
    H3FH, H3/h
  • Links
    NCBI Gene ID: 8355
    neXtProt AC: NX_P68431
    UniProt: P68431

  • Chr Location
    6p22.2; chr6:26270918-26271384 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Hist2h3c2
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 97114 NCBI Gene Model | MGI Sequence Detail 649 C57BL/6J ±  kb
transcript NM_054045 RefSeq | MGI Sequence Detail 649 C57BL/6  
polypeptide NP_473386 RefSeq | MGI Sequence Detail 136 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 3
Other
Accession IDs
less
MGI:2140105
References
more
  • Summaries
    All 20
    Diseases 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:8574 Taylor JD, et al., Sequences of four mouse histone H3 genes: implications for evolution of mouse histone genes. J Mol Evol. 1986;23(3):242-9
  • Latest
    J:80094 Marzluff WF, et al., The human and mouse replication-dependent histone genes. Genomics. 2002 Nov;80(5):487-98

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory