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H3c13 Gene Detail
Summary
  • Symbol
    H3c13
  • Name
    H3 clustered histone 13
  • Synonyms
    H3-616, Hist2h3b
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448351
    NCBI Gene: 319154
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:96175970-96176457 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 41.71 cM, cytoband F1-F2
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448351
protein coding gene Chr3:96175970-96176471 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027614
protein coding gene Chr3:97081430-97081917 (+)
A/J MGP_AJ_G0027574
protein coding gene Chr3:94034190-94034677 (+)
AKR/J MGP_AKRJ_G0027542
protein coding gene Chr3:96241218-96241705 (+)
BALB/cJ MGP_BALBcJ_G0027585
protein coding gene Chr3:93811196-93811683 (+)
C3H/HeJ MGP_C3HHeJ_G0027318
protein coding gene Chr3:96522626-96523128 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028032
protein coding gene Chr3:100640128-100642821 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025374
protein coding gene Chr3:90354207-90354694 (+)
CAST/EiJ MGP_CASTEiJ_G0026770
protein coding gene Chr3:95836094-95837482 (+)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0027435
protein coding gene Chr3:93335015-93336003 (+)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0028086
protein coding gene Chr3:95871860-95872313 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0026320
protein coding gene Chr3:94171746-94173356 (+)
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving H3c13
  • Incidental Mutations
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000074403 Ensembl Gene Model | MGI Sequence Detail 488 C57BL/6J ±  kb
transcript ENSMUST00000098843 Ensembl | MGI Sequence Detail 488 Not Applicable  
polypeptide ENSMUSP00000096442 Ensembl | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 7
References
more
  • Summaries
    All 18
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 5
  • Earliest
    J:34961 Wang ZF, et al., Characterization of the 55-kb mouse histone gene cluster on chromosome 3. Genome Res. 1996 Aug;6(8):702-14
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/14/2021
MGI 6.17
The Jackson Laboratory