About   Help   FAQ
H3c11 Gene Detail
Summary
  • Symbol
    H3c11
  • Name
    H3 clustered histone 11
  • Synonyms
    H3-H, Hist1h3i
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448350
    NCBI Gene: 319153
  • Member of
    Hist1 cluster
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:21967130-21967540 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 7.97 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448350
protein coding gene Chr13:21967085-21967567 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0020255
protein coding gene Chr13:18638335-18639861 (-)
AKR/J MGP_AKRJ_G0020227
protein coding gene Chr13:18954898-18955204 (-)
BALB/cJ MGP_BALBcJ_G0020241
protein coding gene Chr13:18696261-18696687 (-)
C3H/HeJ MGP_C3HHeJ_G0020047
protein coding gene Chr13:19045288-19046124 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0018293
protein coding gene Chr13:16954893-16955429 (-)
CAST/EiJ MGP_CASTEiJ_G0019579
protein coding gene Chr13:18847343-18847729 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0020128
protein coding gene Chr13:18270145-18270441 (-)
FVB/NJ MGP_FVBNJ_G0020111
protein coding gene Chr13:17931169-17931735 (-)
LP/J MGP_LPJ_G0020200
protein coding gene Chr13:19295158-19299044 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0020714
protein coding gene Chr13:18767082-18767478 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving H3c11
  • Incidental Mutations
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000101972 Ensembl Gene Model | MGI Sequence Detail 411 C57BL/6J ±  kb
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:320533 Kawamura M, et al., The expression and nuclear deposition of histone H3.1 in murine oocytes and preimplantation embryos. J Reprod Dev. 2012;58(5):557-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/10/2022
MGI 6.19
The Jackson Laboratory