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Hist1h2ad Gene Detail
Summary
  • Symbol
    Hist1h2ad
  • Name
    histone cluster 1, H2ad
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448289
    NCBI Gene: 319165
  • Member of
    Hist1 cluster
  • Gene Overview
    MyGene.info: HIST1H2AM
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:23574381-23574915 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 9.80 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448289
protein coding gene Chr13:23574381-23574952 (.)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0020298
protein coding gene Chr13:20604980-20605472 (+)
C3H/HeJ MGP_C3HHeJ_G0020050
protein coding gene Chr13:19049404-19049870 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0020067
protein coding gene Chr13:22822377-22822655 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0020115
protein coding gene Chr13:17935066-17935404 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0020146
protein coding gene Chr13:20811142-20811608 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020775
protein coding gene Chr13:20719603-20720065 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    HIST1H2AM, histone cluster 1 H2A family member m
  • Vertebrate Orthologs
    7
  • Human Ortholog
    HIST1H2AM, histone cluster 1 H2A family member m
    Orthology source: HomoloGene
  • Synonyms
    dJ193B12.1, H2A.1, H2AFN, H2A/n
  • Links
    NCBI Gene ID: 8336
    neXtProt AC: NX_P0C0S8
    UniProt: P0C0S8

  • Chr Location
    6p22.1; chr6:27892699-27893185 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Hist1h2ad
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 319165 NCBI Gene Model | MGI Sequence Detail 535 C57BL/6J ±  kb
transcript NM_178188 RefSeq | MGI Sequence Detail 535 C57BL/6  
polypeptide NP_835495 RefSeq | MGI Sequence Detail 130 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 1
    cDNA 2
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:233118 Abdallah BM, et al., DLK1 is a novel regulator of bone mass that mediates estrogen deficiency-induced bone loss in mice. J Bone Miner Res. 2011 Jul;26(7):1457-71

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory