About   Help   FAQ
5330439B14Rik Gene Detail
Summary
  • Symbol
    5330439B14Rik
  • Name
    RIKEN cDNA 5330439B14 gene
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:2447824
    NCBI Gene: 321015
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:142614595-142626462 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 74.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    245 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2447824
antisense lncRNA gene Chr6:142614595-142626462 (.)
129S1/SvImJ MGP_129S1SvImJ_G0004384
antisense lncRNA gene Chr6:147414875-147426730 (+)
A/J MGP_AJ_G0004361
antisense lncRNA gene Chr6:141621700-141633555 (+)
AKR/J MGP_AKRJ_G0004343
antisense lncRNA gene Chr6:145840891-145852744 (+)
BALB/cJ MGP_BALBcJ_G0004347
antisense lncRNA gene Chr6:141395132-141406987 (+)
C3H/HeJ MGP_C3HHeJ_G0004296
antisense lncRNA gene Chr6:145879481-145891336 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004497
antisense lncRNA gene Chr6:151461864-151473719 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003957
antisense lncRNA gene Chr6:140453002-140466589 (+)
CAST/EiJ MGP_CASTEiJ_G0004256
antisense lncRNA gene Chr6:145447499-145459654 (+)
CBA/J MGP_CBAJ_G0004290
antisense lncRNA gene Chr6:157222940-157234793 (+)
DBA/2J MGP_DBA2J_G0004305
antisense lncRNA gene Chr6:140436813-140448652 (+)
FVB/NJ MGP_FVBNJ_G0004322
antisense lncRNA gene Chr6:139205442-139217231 (+)
LP/J MGP_LPJ_G0004384
antisense lncRNA gene Chr6:147553136-147566469 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004313
antisense lncRNA gene Chr6:161108098-161119971 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004494
antisense lncRNA gene Chr6:145668304-145680143 (+)
PWK/PhJ MGP_PWKPhJ_G0004209
antisense lncRNA gene Chr6:138934575-138946471 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004151
antisense lncRNA gene Chr6:143849208-143860955 (+)
WSB/EiJ MGP_WSBEiJ_G0004295
antisense lncRNA gene Chr6:146281766-146294433 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 321015 NCBI Gene Model | MGI Sequence Detail 11868 C57BL/6J ±  kb
transcript NR_037679 RefSeq | MGI Sequence Detail 1392 C57BL/6  
polypeptide Q9D2A3 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    Genomic 2
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
12/04/2018
MGI 6.13
The Jackson Laboratory