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Zswim9 Gene Detail
Summary
  • Symbol
    Zswim9
  • Name
    zinc finger SWIM-type containing 9
  • Synonyms
    6330408A02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2447816
    NCBI Gene: 321008
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:13258967-13278721 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 7.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    108 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2447816
protein coding gene Chr7:13258967-13278721 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031670
protein coding gene Chr7:10652933-10672694 (-)
A/J MGP_AJ_G0031644
protein coding gene Chr7:10515294-10535079 (-)
AKR/J MGP_AKRJ_G0031567
protein coding gene Chr7:10759231-10781233 (-)
BALB/cJ MGP_BALBcJ_G0031649
protein coding gene Chr7:10599062-10618821 (-)
C3H/HeJ MGP_C3HHeJ_G0031370
protein coding gene Chr7:10905313-10926120 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032113
protein coding gene Chr7:11232411-11252164 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029204
protein coding gene Chr7:12350328-12370067 (-)
CAST/EiJ MGP_CASTEiJ_G0030728
protein coding gene Chr7:8376482-8396291 (-)
CBA/J MGP_CBAJ_G0031328
protein coding gene Chr7:11433307-11453068 (-)
DBA/2J MGP_DBA2J_G0031486
protein coding gene Chr7:10375998-10395761 (-)
FVB/NJ MGP_FVBNJ_G0031442
protein coding gene Chr7:10400405-10420160 (-)
LP/J MGP_LPJ_G0031572
protein coding gene Chr7:10763105-10782866 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031477
protein coding gene Chr7:11518897-11538652 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032143
protein coding gene Chr7:10529563-10549316 (-)
PWK/PhJ MGP_PWKPhJ_G0030456
protein coding gene Chr7:8843524-8863360 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030282
protein coding gene Chr7:6607196-6626909 (-)
WSB/EiJ MGP_WSBEiJ_G0030823
protein coding gene Chr7:10565749-10585499 (-)



Homology
more
  • Human Ortholog
    ZSWIM9, zinc finger SWIM-type containing 9
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ZSWIM9, zinc finger SWIM-type containing 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C19orf68
  • Links
    NCBI Gene ID: 374920
    neXtProt AC: NX_Q86XI8
    UniProt: Q86XI8

  • Chr Location
    19q13.33; chr19:48170662-48197621 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 321008 NCBI Gene Model | MGI Sequence Detail 19755 C57BL/6J ±  kb
transcript NM_177312 RefSeq | MGI Sequence Detail 3366 C57BL/6  
polypeptide Q6DI92 UniProt | EBI | MGI Sequence Detail 447 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR004162 E3 ubiquitin-protein ligase SIN-like
    IPR007527 Zinc finger, SWIM-type
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 6
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:202604 Nagamachi A, et al., Haploinsufficiency of SAMD9L, an endosome fusion facilitator, causes myeloid malignancies in mice mimicking human diseases with monosomy 7. Cancer Cell. 2013 Sep 9;24(3):305-17

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory