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Cmtm1 Gene Detail
Summary
  • Symbol
    Cmtm1
  • Name
    CKLF-like MARVEL transmembrane domain containing 1
  • Synonyms
    CHLFH1a, CKLFH1, Cklfsf1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2447159
    NCBI Gene: 100504164
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:104293542-104310145 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 53.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    48 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2447159
protein coding gene Chr8:104292622-104310145 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    CMTM1, CKLF like MARVEL transmembrane domain containing 1
  • Vertebrate Orthologs
    2
  • Human Ortholog
    CMTM1, CKLF like MARVEL transmembrane domain containing 1
    Orthology source: HGNC
  • Synonyms
    CKLFH, CKLFH1, CKLFSF1
  • Links
    NCBI Gene ID: 113540
    neXtProt AC: NX_Q8IZ96
    UniProt: Q8IZ96

  • Chr Location
    16q21; chr16:66566391-66579135 (+)  GRCh38.p7

Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100504164 NCBI Gene Model | MGI Sequence Detail 16604 C57BL/6J ±  kb
transcript NM_181990 RefSeq | MGI Sequence Detail 1130 C57BL/6  
polypeptide NP_871790 RefSeq | MGI Sequence Detail 303 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Gene Ontology 2
  • Earliest
    J:84235 Han W, et al., Identification of eight genes encoding chemokine-like factor superfamily members 1-8 (CKLFSF1-8) by in silico cloning and experimental validation. Genomics. 2003 Jun;81(6):609-17
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory