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Frmpd1 Gene Detail
Summary
  • Symbol
    Frmpd1
  • Name
    FERM and PDZ domain containing 1
  • Synonyms
    mKIAA0967
  • Feature Type
    protein coding gene
  • IDs
    MGI:2446274
    NCBI Gene: 666060
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:45184875-45285936 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 23.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    782 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446274
protein coding gene Chr4:45184416-45285936 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028241
protein coding gene Chr4:43405004-43518085 (+)
A/J MGP_AJ_G0028199
protein coding gene Chr4:41855051-41958973 (+)
AKR/J MGP_AKRJ_G0028150
protein coding gene Chr4:42852905-42956835 (+)
BALB/cJ MGP_BALBcJ_G0028219
protein coding gene Chr4:41935176-42042375 (+)
C3H/HeJ MGP_C3HHeJ_G0027940
protein coding gene Chr4:43459782-43566086 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028660
protein coding gene Chr4:45044843-45153799 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025969
protein coding gene Chr4:39248766-39353197 (+)
CAST/EiJ MGP_CASTEiJ_G0027380
protein coding gene Chr4:43008467-43113982 (+)
CBA/J MGP_CBAJ_G0027906
protein coding gene Chr4:46441516-46563565 (+)
DBA/2J MGP_DBA2J_G0028056
protein coding gene Chr4:41751520-41853208 (+)
FVB/NJ MGP_FVBNJ_G0028023
protein coding gene Chr4:40979341-41090124 (+)
LP/J MGP_LPJ_G0028155
protein coding gene Chr4:43457201-43564551 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028047
protein coding gene Chr4:49588050-49699129 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028695
protein coding gene Chr4:43060894-43171343 (+)
PWK/PhJ MGP_PWKPhJ_G0027104
protein coding gene Chr4:41821653-41924421 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026932
protein coding gene Chr4:42576190-42681082 (+)
WSB/EiJ MGP_WSBEiJ_G0027457
protein coding gene Chr4:42943917-43049233 (+)



Homology
more
  • Human Ortholog
    FRMPD1, FERM and PDZ domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    FRMPD1, FERM and PDZ domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    FRMD2
  • Links
    NCBI Gene ID: 22844
    neXtProt AC: NX_Q5SYB0
    UniProt: Q5SYB0

  • Chr Location
    9p13.2; chr9:37602979-37746904 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035615 Ensembl Gene Model | MGI Sequence Detail 101062 C57BL/6J ±  kb
transcript ENSMUST00000107804 Ensembl | MGI Sequence Detail 5241 Not Applicable  
polypeptide ENSMUSP00000103434 Ensembl | MGI Sequence Detail 1549 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 36
    cDNA 36

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Gene Ontology 4
    Phenotypes 2
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:200468 Pan Z, et al., Structural and biochemical characterization of the interaction between LGN and Frmpd1. J Mol Biol. 2013 Mar 25;425(6):1039-49

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory