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Foxred1
Gene Detail
Symbol

Name
ID
Foxred1
FAD-dependent oxidoreductase domain containing 1
MGI:2446262
Synonyms
MGC:38853, TEG-23, Tex23
Feature Type
protein coding gene
Genetic Map
Chromosome 9
20.08 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:35204206-35211055 bp, - strand
From VEGA annotation of GRCm38

  6850 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9712  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Foxred1

Human
homologs
Human Homolog FOXRED1, FAD-dependent oxidoreductase domain containing 1
NCBI Gene ID 55572
neXtProt AC  NX_Q96CU9
Human Synonyms  H17
Human Chr (Location)  11q24.2; chr11:126269040-126278132 (+)  GRCh38
Disease Associations  (2) Diseases Associated with Human FOXRED1
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(4) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Foxred1 interacts with 222 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (14 annotations)
Process oxidation-reduction process
Component integral component of membrane, membrane, ...
Function epoxyqueuosine reductase activity, malolactic enzyme activity, ...
External Resources: FuncBase
Expression
cDNA source data(51)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(51) cDNA(51)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000034114 (Evidence)
Ensembl Gene ModelENSMUSG00000039048 (Evidence)
Entrez Gene235169 (Evidence)
UniGene138512
DFCITC1602726, TC1628637, TC1576026, TC1595422
DoTSDT.110641979, DT.111099827, DT.101176167, DT.111168983, DT.55211650, DT.87068781, DT.91425806, DT.91333590, DT.94191723
NIA Mouse Gene IndexU030664
EC1.-.-.-
Consensus CDS ProjectCCDS22958.1
International Mouse Knockout Project StatusFoxred1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034114 VEGA Gene Model | MGI Sequence Detail 6850 C57BL/6J ±  kb
transcript OTTMUST00000086278 VEGA | MGI Sequence Detail 2232 Not Applicable 
polypeptide OTTMUSP00000046697 VEGA | MGI Sequence Detail 493 Not Applicable 

For the selected sequences
All sequences(101) RefSeq(18) UniProt(13)
Polymorphisms
SNPs within 2kb(63 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006076 FAD dependent oxidoreductase
Protein Ontology PR:000031829 FAD-dependent oxidoreductase domain-containing protein 1
References
(Earliest) J:35463 Lopez-Fernandez LA, et al., Characterization of genes expressed early in mouse spermatogenesis, isolated from a subtractive cDNA library. Mamm Genome. 1996 Sep;7(9):698-700
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(38)
Other
accession IDs
MGI:1201687

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory