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Foxred1
Gene Detail
Symbol

Name
ID
Foxred1
FAD-dependent oxidoreductase domain containing 1
MGI:2446262
Synonyms
MGC:38853, TEG-23, Tex23
Feature Type
protein coding gene
Genetic Map
Chromosome 9
20.08 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr9:35204206-35211055 bp, - strand
From VEGA annotation of GRCm38

  6850 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9712  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: FOXRED1
Gene Tree: Foxred1

Human
homologs
FOXRED1, FAD-dependent oxidoreductase domain containing 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 55572
neXtProt AC: NX_Q96CU9

Human Synonyms: FP634, H17

Human Chr (Location): 11q24.2; chr11:126269040-126278132 (+)  GRCh38.p2

Disease Associations: (2) Diseases Associated with Human FOXRED1

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(4) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Foxred1 interacts with 221 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
cDNA source data(51)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase foxred1    NEW 
Molecular
reagents
All nucleic(51) cDNA(51)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000034114 (Evidence)
Ensembl Gene Model ENSMUSG00000039048 (Evidence)
Entrez Gene 235169 (Evidence)
UniGene 138512
DFCI TC1595422, TC1576026, TC1628637, TC1602726
DoTS DT.111099827, DT.101176167, DT.110641979, DT.111168983, DT.87068781, DT.55211650, DT.91333590, DT.91425806, DT.94191723
NIA Mouse Gene Index U030664
EC 1.-.-.-
Consensus CDS Project CCDS22958.1
International Mouse Phenotyping Consortium Status Foxred1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034114 VEGA Gene Model | MGI Sequence Detail 6850 C57BL/6J ±  kb
transcript OTTMUST00000086278 VEGA | MGI Sequence Detail 2232 Not Applicable 
polypeptide OTTMUSP00000046697 VEGA | MGI Sequence Detail 493 Not Applicable 

For the selected sequences
All sequences(95) RefSeq(17) UniProt(7)
Polymorphisms
SNPs within 2kb(63 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006076 FAD dependent oxidoreductase
Protein Ontology PR:000031829 FAD-dependent oxidoreductase domain-containing protein 1
References
(Earliest) J:35463 Lopez-Fernandez LA, et al., Characterization of genes expressed early in mouse spermatogenesis, isolated from a subtractive cDNA library. Mamm Genome. 1996 Sep;7(9):698-700
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)
Other
accession IDs
MGI:1201687

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory