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Zfc3h1 Gene Detail
Summary
  • Symbol
    Zfc3h1
  • Name
    zinc finger, C3H1-type containing
  • Synonyms
    Ccdc131, Psrc2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2446143
    NCBI Gene: 216345
  • Alliance
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:115384959-115432772 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 63.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    392 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446143
protein coding gene Chr10:115384943-115432772 (.)
129S1/SvImJ MGP_129S1SvImJ_G0017738
protein coding gene Chr10:118089536-118141710 (+)
A/J MGP_AJ_G0017714
protein coding gene Chr10:113557573-113606774 (+)
AKR/J MGP_AKRJ_G0017676
protein coding gene Chr10:116852986-116901736 (+)
BALB/cJ MGP_BALBcJ_G0017677
protein coding gene Chr10:113955575-114003384 (+)
C3H/HeJ MGP_C3HHeJ_G0017502
protein coding gene Chr10:117078043-117127658 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018134
protein coding gene Chr10:122196210-122250685 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015814
protein coding gene Chr10:108184860-108232175 (+)
CAST/EiJ MGP_CASTEiJ_G0017064
protein coding gene Chr10:117310313-117365051 (+)
CBA/J MGP_CBAJ_G0017471
protein coding gene Chr10:126961703-127015241 (+)
DBA/2J MGP_DBA2J_G0017576
protein coding gene Chr10:112710365-112759139 (+)
FVB/NJ MGP_FVBNJ_G0017571
protein coding gene Chr10:111657883-111706096 (+)
LP/J MGP_LPJ_G0017651
protein coding gene Chr10:118676392-118728040 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017600
protein coding gene Chr10:129907172-129957775 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018172
protein coding gene Chr10:116888096-116939626 (+)
PWK/PhJ MGP_PWKPhJ_G0016846
protein coding gene Chr10:112778990-112828022 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016636
protein coding gene Chr10:115693146-115757817 (+)
WSB/EiJ MGP_WSBEiJ_G0017124
protein coding gene Chr10:117065407-117114274 (+)



Homology
more
  • Human Ortholog
    ZFC3H1, zinc finger C3H1-type containing
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ZFC3H1, zinc finger C3H1-type containing
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CCDC131, CSRC2, PSRC2
  • Links
    NCBI Gene ID: 196441
    neXtProt AC: NX_O60293
    UniProt: O60293

  • Chr Location
    12q21.1; chr12:71609599-71663969 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034163 Ensembl Gene Model | MGI Sequence Detail 47814 C57BL/6J ±  kb
transcript ENSMUST00000036044 Ensembl | MGI Sequence Detail 6957 Not Applicable  
polypeptide ENSMUSP00000044069 Ensembl | MGI Sequence Detail 1992 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR003107 HAT (Half-A-TPR) repeat
    IPR039278 Protein Red1
    IPR019607 Putative zinc-finger domain
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
less
  • All nucleic 91
    cDNA 91

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory