About   Help   FAQ
Cyp4f39
Gene Detail
 Symbol
Name
ID
Cyp4f39
cytochrome P450, family 4, subfamily f, polypeptide 39
MGI:2445210
Synonyms 4732474A20Rik
Feature Type protein coding gene
Genetic Map
Chromosome 17
17.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr17:32468462-32492479 bp, + strand
From Ensembl annotation of GRCm38

  24018 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:69814  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Protein SuperFamily: cytochrome P450 CYP4B1
Gene Tree: Cyp4f39

Human
homologs
Human Homolog CYP4F22, cytochrome P450, family 4, subfamily F, polypeptide 22
NCBI Gene ID 126410
neXtProt AC  NX_Q6NT55
Human Synonyms  ARCI5, INLNE, LI3
Human Chr (Location)  19p13.12; chr19:15508525-15552317 (+)  GRCh38
Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cyp4f39 interacts with 8 markers (Mir330, Mir423, Mir1930, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (5 annotations)
Process oxidation-reduction process
Component cellular_component
Function metal ion binding, monooxygenase activity, ...
External Resources: FuncBase
Expression
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000061126 (Evidence)
Entrez Gene320997 (Evidence)
UniGene130900
DFCITC1588342
DoTSDT.94271305
NIA Mouse Gene IndexU152138
Consensus CDS ProjectCCDS28618.1
International Mouse Knockout Project StatusCyp4f39
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061126 Ensembl Gene Model | MGI Sequence Detail 24018 C57BL/6J ±  kb
transcript ENSMUST00000003413 Ensembl | MGI Sequence Detail 1599 Not Applicable 
polypeptide ENSMUSP00000003413 Ensembl | MGI Sequence Detail 532 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(336 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001128 Cytochrome P450
InterPro IPR017972 Cytochrome P450, conserved site
InterPro IPR002401 Cytochrome P450, E-class, group I
Protein Ontology PR:000006141 cytochrome P450 4F22
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
All references(19)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/12/2014
MGI 5.19
The Jackson Laboratory