Ppapdc3
Gene Detail

Symbol Name ID

Ppapdc3 phosphatidic acid phosphatase type 2 domain containing 3 MGI:2445183

Synonyms

D830019K17Rik, NET39

Feature Type

protein coding gene

Genetic Map

Chromosome 2

22.02 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr2:32095528-32110820 bp, + strand From VEGA annotation of GRCm38   15293 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:41885  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ppapdc3

Human homologs

Human Homolog		PPAPDC3, phosphatidic acid phosphatase type 2 domain containing 3
NCBI Gene ID		84814
neXtProt AC		NX_Q8NBV4
Human Synonyms		C9orf67, NET39
Human Chr (Location)		9q34.13; chr9:134165081-134184649 (+)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Targeted(1)

Gene Ontology (GO) classifications

All GO classifications: (11 annotations)

Process	negative regulation of myotube differentiation
Component	endoplasmic reticulum, integral to membrane, ...
Function	catalytic activity, hydrolase activity

External Resources: FuncBase

Expression

cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(15) cDNA(15)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000012943 (Evidence)
Ensembl Gene Model	ENSMUSG00000051373 (Evidence)
Entrez Gene	227721 (Evidence)
UniGene	257236
DFCI	TC1583290, TC1645984
DoTS	DT.101717296, DT.94290727
NIA Mouse Gene Index	U001611
EC	3.1.3.-
Consensus CDS Project	CCDS15906.1
International Mouse Knockout Project Status	Ppapdc3

Sequences

Length	Strain/Species
genomic	OTTMUSG00000012943	VEGA Gene Model | MGI Sequence Detail	15293	C57BL/6J
transcript	OTTMUST00000031093	VEGA | MGI Sequence Detail	1947	Not Applicable
polypeptide	OTTMUSP00000013917	VEGA | MGI Sequence Detail	271	Not Applicable

All sequences(24) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(35 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR016118	Phosphatidic acid phosphatase/chloroperoxidase, N-terminal
InterPro	IPR000326	Phosphatidic acid phosphatase type 2/haloperoxidase
Protein Ontology	PR:000030220	probable lipid phosphate phosphatase PPAPDC3

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(25)