About   Help   FAQ
Cnst Gene Detail
Summary
  • Symbol
    Cnst
  • Name
    consortin, connexin sorting protein
  • Synonyms
    9630058J23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445141
    NCBI Gene: 226744
  • Gene Overview
    MyGene.info: CNST
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:179546370-179627478 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 83.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    467 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445141
protein coding gene Chr1:179546346-179627478 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016860
protein coding gene Chr1:185914100-185996800 (+)
A/J MGP_AJ_G0016839
protein coding gene Chr1:178432542-178517063 (+)
AKR/J MGP_AKRJ_G0016805
protein coding gene Chr1:183748570-183826150 (+)
BALB/cJ MGP_BALBcJ_G0016797
protein coding gene Chr1:179053310-179140881 (+)
C3H/HeJ MGP_C3HHeJ_G0016622
protein coding gene Chr1:184479305-184560881 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017260
protein coding gene Chr1:191935615-192016614 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014968
protein coding gene Chr1:169425345-169506350 (+)
CAST/EiJ MGP_CASTEiJ_G0016203
protein coding gene Chr1:183785668-183879648 (+)
CBA/J MGP_CBAJ_G0016596
protein coding gene Chr1:199088679-199178710 (+)
DBA/2J MGP_DBA2J_G0016702
protein coding gene Chr1:177268459-177351927 (+)
FVB/NJ MGP_FVBNJ_G0016698
protein coding gene Chr1:175347686-175429049 (+)
LP/J MGP_LPJ_G0016776
protein coding gene Chr1:187191343-187273634 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016729
protein coding gene Chr1:206236748-206319547 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017297
protein coding gene Chr1:183468330-183552439 (+)
PWK/PhJ MGP_PWKPhJ_G0015991
protein coding gene Chr1:176350332-176431492 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015767
protein coding gene Chr1:182430382-182516214 (+)
WSB/EiJ MGP_WSBEiJ_G0016266
protein coding gene Chr1:183703491-183783850 (+)



Homology
more
  • Human Ortholog
    CNST, consortin, connexin sorting protein
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CNST, consortin, connexin sorting protein
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf71, PPP1R64
  • Links
    NCBI Gene ID: 163882
    neXtProt AC: NX_Q6PJW8
    UniProt: Q6PJW8

  • Chr Location
    1q44; chr1:246566337-246668587 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 17139
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CNST
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038949 Ensembl Gene Model | MGI Sequence Detail 81109 C57BL/6J ±  kb
transcript ENSMUST00000040706 Ensembl | MGI Sequence Detail 4709 Not Applicable  
polypeptide ENSMUSP00000048205 Ensembl | MGI Sequence Detail 711 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 79
    cDNA 79

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory