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6430571L13Rik Gene Detail
Summary
  • Symbol
    6430571L13Rik
  • Name
    RIKEN cDNA 6430571L13 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445137
    NCBI Gene: 235599
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:107340640-107349683 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 58.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445137
protein coding gene Chr9:107340602-107352422 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035251
protein coding gene Chr9:109197017-109209451 (+)
A/J MGP_AJ_G0035230
protein coding gene Chr9:105236031-105247281 (+)
AKR/J MGP_AKRJ_G0035162
protein coding gene Chr9:107860122-107871430 (+)
BALB/cJ MGP_BALBcJ_G0035224
protein coding gene Chr9:104905379-104916671 (+)
C3H/HeJ MGP_C3HHeJ_G0034934
protein coding gene Chr9:108258092-108270375 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035744
protein coding gene Chr9:112200015-112215900 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032642
protein coding gene Chr9:102664716-102676457 (+)
CAST/EiJ MGP_CASTEiJ_G0034245
protein coding gene Chr9:108190889-108204089 (+)
CBA/J MGP_CBAJ_G0034902
protein coding gene Chr9:116173493-116185116 (+)
DBA/2J MGP_DBA2J_G0035063
protein coding gene Chr9:104689511-104701775 (+)
FVB/NJ MGP_FVBNJ_G0035011
protein coding gene Chr9:103451587-103464006 (+)
LP/J MGP_LPJ_G0035139
protein coding gene Chr9:109406704-109419651 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035050
protein coding gene Chr9:117763200-117777550 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035765
protein coding gene Chr9:108125841-108137179 (+)
PWK/PhJ MGP_PWKPhJ_G0033952
protein coding gene Chr9:105003380-105016858 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033787
protein coding gene Chr9:108192196-108205648 (+)
WSB/EiJ MGP_WSBEiJ_G0034366
protein coding gene Chr9:108013220-108026852 (+)



Homology
more
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
  • Vertebrate Orthologs
    11
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
    Orthology source: HomoloGene, HGNC
  • Synonyms
    G20
  • Links
    NCBI Gene ID: 51161
    neXtProt AC: NX_Q9UK00
    UniProt: Q9UK00

  • Chr Location
    3p21.31; chr3:50558025-50574835 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235599 NCBI Gene Model | MGI Sequence Detail 9044 C57BL/6J ±  kb
transcript NM_175486 RefSeq | MGI Sequence Detail 2552 C57BL/6  
polypeptide Q8BGK9 UniProt | EBI | MGI Sequence Detail 164 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR042351 Uncharacterized protein C3orf18-like
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 4
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory