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6430571L13Rik Gene Detail
Summary
  • Symbol
    6430571L13Rik
  • Name
    RIKEN cDNA 6430571L13 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445137
    NCBI Gene: 235599
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:107340640-107349683 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 58.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    138 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445137
protein coding gene Chr9:107340602-107352422 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035251
protein coding gene Chr9:109197017-109209451 (+)
A/J MGP_AJ_G0035230
protein coding gene Chr9:105236031-105247281 (+)
AKR/J MGP_AKRJ_G0035162
protein coding gene Chr9:107860122-107871430 (+)
BALB/cJ MGP_BALBcJ_G0035224
protein coding gene Chr9:104905379-104916671 (+)
C3H/HeJ MGP_C3HHeJ_G0034934
protein coding gene Chr9:108258092-108270375 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035744
protein coding gene Chr9:112200015-112215900 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032642
protein coding gene Chr9:102664716-102676457 (+)
CAST/EiJ MGP_CASTEiJ_G0034245
protein coding gene Chr9:108190889-108204089 (+)
CBA/J MGP_CBAJ_G0034902
protein coding gene Chr9:116173493-116185116 (+)
DBA/2J MGP_DBA2J_G0035063
protein coding gene Chr9:104689511-104701775 (+)
FVB/NJ MGP_FVBNJ_G0035011
protein coding gene Chr9:103451587-103464006 (+)
LP/J MGP_LPJ_G0035139
protein coding gene Chr9:109406704-109419651 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035050
protein coding gene Chr9:117763200-117777550 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035765
protein coding gene Chr9:108125841-108137179 (+)
PWK/PhJ MGP_PWKPhJ_G0033952
protein coding gene Chr9:105003380-105016858 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033787
protein coding gene Chr9:108192196-108205648 (+)
WSB/EiJ MGP_WSBEiJ_G0034366
protein coding gene Chr9:108013220-108026852 (+)



Homology
more
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
  • Vertebrate Orthologs
    11
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
    Orthology source: HomoloGene, HGNC
  • Synonyms
    G20
  • Links
    NCBI Gene ID: 51161
    neXtProt AC: NX_Q9UK00
    UniProt: Q9UK00

  • Chr Location
    3p21.31; chr3:50558025-50574835 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235599 NCBI Gene Model | MGI Sequence Detail 9044 C57BL/6J ±  kb
transcript NM_175486 RefSeq | MGI Sequence Detail 2552 C57BL/6  
polypeptide Q8BGK9 UniProt | EBI | MGI Sequence Detail 164 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR042351 Uncharacterized protein C3orf18-like
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 4
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/13/2020
MGI 6.16
The Jackson Laboratory