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Trappc12 Gene Detail
Summary
  • Symbol
    Trappc12
  • Name
    trafficking protein particle complex 12
  • Synonyms
    CGI-87, D930014A20Rik, Ttc15
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445089
    NCBI Gene: 217449
Location & Maps
more
  • Sequence Map
    Chr12:28690629-28750453 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      59825 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    TRAPPC12, trafficking protein particle complex 12
  • Vertebrate Orthologs
    10
  • Human Ortholog
    TRAPPC12, trafficking protein particle complex 12
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CGI-87, TTC15, TTC-15
  • Links
    NCBI Gene ID: 51112
    neXtProt AC: NX_Q8WVT3

  • Chr Location
    2p25.3; chr2:3379672-3479571 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    20
  • Gene trapped
    18
  • Targeted
    2
  • Incidental Mutations
    APF , CvDC
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020628 Ensembl Gene Model | MGI Sequence Detail 59825 C57BL/6J ±  kb
transcript ENSMUST00000020954 Ensembl | MGI Sequence Detail 3377 Not Applicable  
polypeptide ENSMUSP00000020954 Ensembl | MGI Sequence Detail 797 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    587 from dbSNP Build 142
Protein
Information
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  • UniProt
    9 Sequences
  • Protein Ontology
    PR:000029820 trafficking protein particle complex subunit 12
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain
    IPR019734 Tetratricopeptide repeat
    IPR013026 Tetratricopeptide repeat-containing domain
Molecular
Reagents
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  • All nucleic 110
    cDNA 110

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory