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Pamr1 Gene Detail
Summary
  • Symbol
    Pamr1
  • Name
    peptidase domain containing associated with muscle regeneration 1
  • Synonyms
    E430002G05Rik, RAMP
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445082
    NCBI Gene: 210622
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:102550012-102643041 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 54.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1243 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445082
protein coding gene Chr2:102549931-102643041 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026197
protein coding gene Chr2:104479601-104568120 (+)
A/J MGP_AJ_G0026158
protein coding gene Chr2:100183295-100271120 (+)
AKR/J MGP_AKRJ_G0026139
protein coding gene Chr2:102888668-102980418 (+)
BALB/cJ MGP_BALBcJ_G0026167
protein coding gene Chr2:100461011-100546270 (+)
C3H/HeJ MGP_C3HHeJ_G0025918
protein coding gene Chr2:103259318-103347359 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026618
protein coding gene Chr2:107985621-108078166 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024009
protein coding gene Chr2:95858872-95947087 (+)
CAST/EiJ MGP_CASTEiJ_G0025383
protein coding gene Chr2:103694484-103785304 (+)
CBA/J MGP_CBAJ_G0025896
protein coding gene Chr2:111707635-111792981 (+)
DBA/2J MGP_DBA2J_G0026032
protein coding gene Chr2:99746776-99831449 (+)
FVB/NJ MGP_FVBNJ_G0025995
protein coding gene Chr2:98748729-98834759 (+)
LP/J MGP_LPJ_G0026136
protein coding gene Chr2:104627202-104715886 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026021
protein coding gene Chr2:115667089-115756519 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026672
protein coding gene Chr2:103110964-103198102 (+)
PWK/PhJ MGP_PWKPhJ_G0025118
protein coding gene Chr2:99244674-99332362 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024919
protein coding gene Chr2:102329533-102422041 (+)
WSB/EiJ MGP_WSBEiJ_G0025450
protein coding gene Chr2:103810334-103906707 (+)



Homology
more
  • Human Ortholog
    PAMR1, peptidase domain containing associated with muscle regeneration 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PAMR1, peptidase domain containing associated with muscle regeneration 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DKFZP586H2123, FP938, RAMP
  • Links
    NCBI Gene ID: 25891
    neXtProt AC: NX_Q6UXH9
    UniProt: Q6UXH9

  • Chr Location
    11p13; chr11:35431827-35530300 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027188 Ensembl Gene Model | MGI Sequence Detail 93030 C57BL/6J ±  kb
transcript ENSMUST00000028612 Ensembl | MGI Sequence Detail 2864 Not Applicable  
polypeptide ENSMUSP00000028612 Ensembl | MGI Sequence Detail 720 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 29
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 10
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory