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Ccdc85a Gene Detail
Summary
  • Symbol
    Ccdc85a
  • Name
    coiled-coil domain containing 85A
  • Synonyms
    E030025D05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445069
    NCBI Gene: 216613
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:28385685-28584324 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 16.22 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1895 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445069
protein coding gene Chr11:28385684-28587229 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018101
protein coding gene Chr11:26349969-26562163 (-)
A/J MGP_AJ_G0018073
protein coding gene Chr11:25389387-25599884 (-)
AKR/J MGP_AKRJ_G0018038
protein coding gene Chr11:26195518-26419659 (-)
BALB/cJ MGP_BALBcJ_G0018041
protein coding gene Chr11:25551117-25752119 (-)
C3H/HeJ MGP_C3HHeJ_G0017855
protein coding gene Chr11:26143665-26350090 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018494
protein coding gene Chr11:27333744-27546442 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016151
protein coding gene Chr11:24064502-24267305 (-)
CAST/EiJ MGP_CASTEiJ_G0017417
protein coding gene Chr11:26165488-26375348 (-)
CBA/J MGP_CBAJ_G0017829
protein coding gene Chr11:28553959-28789146 (-)
DBA/2J MGP_DBA2J_G0017939
protein coding gene Chr11:25243628-25446395 (-)
FVB/NJ MGP_FVBNJ_G0017931
protein coding gene Chr11:25056496-25250528 (-)
LP/J MGP_LPJ_G0018011
protein coding gene Chr11:26607894-26819454 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017957
protein coding gene Chr11:29558641-29819312 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018534
protein coding gene Chr11:26339504-26553215 (-)
PWK/PhJ MGP_PWKPhJ_G0017198
protein coding gene Chr11:25333875-25548712 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016994
protein coding gene Chr11:26019789-26229916 (-)
WSB/EiJ MGP_WSBEiJ_G0017470
protein coding gene Chr11:26023111-26232541 (-)



Homology
more
  • Human Ortholog
    CCDC85A, coiled-coil domain containing 85A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC85A, coiled-coil domain containing 85A
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 114800
    neXtProt AC: NX_Q96PX6
    UniProt: Q96PX6

  • Chr Location
    2p16.1; chr2:56184123-56386174 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032878 Ensembl Gene Model | MGI Sequence Detail 198640 C57BL/6J ±  kb
transcript ENSMUST00000146385 Ensembl | MGI Sequence Detail 3798 Not Applicable  
polypeptide ENSMUSP00000124972 Ensembl | MGI Sequence Detail 545 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    Genomic 2
    cDNA 13

    Microarray probesets 4
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory