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Slc25a21
Gene Detail
 Symbol
Name
ID
Slc25a21
solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
MGI:2445059
Synonyms 9930033G19Rik
Feature Type protein coding gene
Genetic Map
Chromosome 12
24.54 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:56712634-57197472 bp, - strand
From VEGA annotation of GRCm38

  484839 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:6988  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc25a21

Human
homologs
Human Homolog SLC25A21, solute carrier family 25 (mitochondrial oxoadipate carrier), member 21
NCBI Gene ID 89874
neXtProt AC  NX_Q9BQT8
Human Synonyms  ODC, ODC1
Human Chr (Location)  14q11.2; chr14:36677921-37172660 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc25a21 interacts with 181 markers (Mir7-1, Mir16-2, Mir19a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process transport
Component integral component of membrane, membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (115)    Tissues (95)    Images (27)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 115
cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(10)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000023139 (Evidence)
Ensembl Gene ModelENSMUSG00000035472 (Evidence)
Entrez Gene217593 (Evidence)
NIA Mouse Gene IndexU033973
Consensus CDS ProjectCCDS25925.1, CCDS49069.1
International Mouse Knockout Project StatusSlc25a21
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023139 VEGA Gene Model | MGI Sequence Detail 484839 C57BL/6J ±  kb
transcript OTTMUST00000055919 VEGA | MGI Sequence Detail 2609 Not Applicable 
polypeptide OTTMUSP00000026828 VEGA | MGI Sequence Detail 298 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(4) UniProt(3)
Polymorphisms SNPs within 2kb(3290 from dbSNP Build 137)    SNPs within 2kb including multiple locations(3296)
Protein-related
information
ResourceIDDescription
InterPro IPR023395 Mitochondrial carrier domain
InterPro IPR018108 Mitochondrial substrate/solute carrier
Protein Ontology PR:000015017 mitochondrial 2-oxodicarboxylate carrier
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:201630 Ryder E, et al., Molecular characterization of mutant mouse strains generated from the EUCOMM/KOMP-CSD ES cell resource. Mamm Genome. 2013 Aug;24(7-8):286-94
All references(30)
Other
accession IDs
MGI:2145073

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory