Slc25a21
Gene Detail

Symbol

Name
ID

Slc25a21
solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21
MGI:2445059

Synonyms

9930033G19Rik

Feature Type

protein coding gene

Genetic Map

Chromosome 12
24.54 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr12:56712634-57197472 bp, - strand From VEGA annotation of GRCm38   484839 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate
homology

HomoloGene:6988  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slc25a21

Human
homologs

Human Homolog		SLC25A21, solute carrier family 25 (mitochondrial oxoadipate carrier), member 21
NCBI Gene ID		89874
neXtProt AC		NX_Q9BQT8
Human Synonyms		ODC, ODC1
Human Chr (Location)		14q11.2; chr14:36677921-37172660 (-)  GRCh38

Mutations,
alleles, and
phenotypes

All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )

Interactions

Slc25a21 interacts with 181 markers (Mir7-1, Mir16-2, Mir19a, ...)

View All

Gene Ontology
(GO)
classifications

All GO classifications: (6 annotations)

Process	transport
Component	integral component of membrane, membrane, ...
Function	molecular_function

External Resources: FuncBase

Expression

Literature Summary: (2 records)

Data Summary: Results (115)    Tissues (95)    Images (27)    Tissue x Stage Matrix (view)

Assay Type	Results
RNA in situ	115

cDNA source data(10)
External Resources: Allen Institute   GEO   Expression Atlas

Molecular
reagents

All nucleic(10) cDNA(10)
Microarray probesets(2)

Other database
links

VEGA Gene Model	OTTMUSG00000023139 (Evidence)
Ensembl Gene Model	ENSMUSG00000035472 (Evidence)
Entrez Gene	217593 (Evidence)
NIA Mouse Gene Index	U033973
Consensus CDS Project	CCDS25925.1, CCDS49069.1
International Mouse Knockout Project Status	Slc25a21

Sequences

Length	Strain/Species
genomic	OTTMUSG00000023139	VEGA Gene Model | MGI Sequence Detail	484839	C57BL/6J
transcript	OTTMUST00000055919	VEGA | MGI Sequence Detail	2609	Not Applicable
polypeptide	OTTMUSP00000026828	VEGA | MGI Sequence Detail	298	Not Applicable

All sequences(32) RefSeq(4) UniProt(3)

Polymorphisms

SNPs within 2kb(3290 from dbSNP Build 137)    SNPs within 2kb including multiple locations(3296)

Protein-related
information

Resource	ID	Description
InterPro	IPR023395	Mitochondrial carrier domain
InterPro	IPR018108	Mitochondrial substrate/solute carrier
Protein Ontology	PR:000015017	mitochondrial 2-oxodicarboxylate carrier

References

(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:201630 Ryder E, et al., Molecular characterization of mutant mouse strains generated from the EUCOMM/KOMP-CSD ES cell resource. Mamm Genome. 2013 Aug;24(7-8):286-94
All references(31)

Other
accession IDs

MGI:2145073