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Wscd2 Gene Detail
Summary
  • Symbol
    Wscd2
  • Name
    WSC domain containing 2
  • Synonyms
    4933413A10Rik, C530024P05Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445030
    NCBI Gene: 320916
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:113490333-113589725 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 55.55 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    803 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445030
protein coding gene Chr5:113489110-113589725 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029918
protein coding gene Chr5:116161288-116254709 (+)
A/J MGP_AJ_G0029883
protein coding gene Chr5:111613731-111705206 (+)
AKR/J MGP_AKRJ_G0029821
protein coding gene Chr5:115155993-115245251 (+)
BALB/cJ MGP_BALBcJ_G0029894
protein coding gene Chr5:112980674-113070431 (+)
C3H/HeJ MGP_C3HHeJ_G0029614
protein coding gene Chr5:115619633-115715075 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030348
protein coding gene Chr5:120677114-120776631 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027576
protein coding gene Chr5:106442785-106531356 (+)
CAST/EiJ MGP_CASTEiJ_G0029022
protein coding gene Chr5:114546493-114650387 (+)
CBA/J MGP_CBAJ_G0029581
protein coding gene Chr5:125244777-125344469 (+)
DBA/2J MGP_DBA2J_G0029731
protein coding gene Chr5:111682143-111772183 (+)
FVB/NJ MGP_FVBNJ_G0029688
protein coding gene Chr5:110446902-110539027 (+)
LP/J MGP_LPJ_G0029820
protein coding gene Chr5:116731721-116823487 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029719
protein coding gene Chr5:129734320-129836202 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030389
protein coding gene Chr5:114606126-114700550 (+)
PWK/PhJ MGP_PWKPhJ_G0028736
protein coding gene Chr5:110300765-110395546 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028574
protein coding gene Chr5:112120003-112218651 (+)
WSB/EiJ MGP_WSBEiJ_G0029098
protein coding gene Chr5:115154570-115250616 (+)



Homology
more
  • Human Ortholog
    WSCD2, WSC domain containing 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    WSCD2, WSC domain containing 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 9671
    neXtProt AC: NX_Q2TBF2
    UniProt: Q2TBF2

  • Chr Location
    12q23.3; chr12:108129343-108250537 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000063430 Ensembl Gene Model | MGI Sequence Detail 99393 C57BL/6J ±  kb
transcript ENSMUST00000094452 Ensembl | MGI Sequence Detail 4302 Not Applicable  
polypeptide ENSMUSP00000092021 Ensembl | MGI Sequence Detail 571 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    cDNA 16

    Microarray probesets 2
Other
Accession IDs
less
MGI:2685296
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory