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Ccdc186
Gene Detail
Symbol

Name
ID
Ccdc186
coiled-coil domain containing 186
MGI:2445022
Synonyms
1810028B20Rik, A630007B06Rik, Otg1
Feature Type
protein coding gene
Genetic Map
Chromosome 19
51.99 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr19:56787481-56822190 bp, - strand
From VEGA annotation of GRCm38

  34710 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9963  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CCDC186
Gene Tree: Ccdc186

Human
homologs
CCDC186, coiled-coil domain containing 186
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55088
neXtProt AC: NX_Q7Z3E2

Human Synonyms: C10orf118

Human Chr (Location): 10q25.3; chr10:114120856-114174605 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(2) Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Ccdc186 interacts with 368 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (2)    Tissues (2)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 2
cDNA source data(18)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase ccdc186    NEW 
Molecular
reagents
All nucleic(20) Genomic(1) cDNA(18) Other(1)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000028286 (Evidence)
Ensembl Gene Model ENSMUSG00000035173 (Evidence)
Entrez Gene 213993 (Evidence)
DFCI TC1599347, TC1599236, TC1604745, TC1628815, TC1618165, TC1648468
DoTS DT.528398, DT.91578799, DT.55122140
NIA Mouse Gene Index U039173
Consensus CDS Project CCDS29921.1
International Mouse Phenotyping Consortium Status Ccdc186
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028286 VEGA Gene Model | MGI Sequence Detail 34710 C57BL/6J ±  kb
transcript OTTMUST00000070091 VEGA | MGI Sequence Detail 6445 Not Applicable 
polypeptide OTTMUSP00000035683 VEGA | MGI Sequence Detail 917 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(6) UniProt(2)
Polymorphisms
SNPs within 2kb(350 from dbSNP Build 137)
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:1916382, MGI:2147482

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory