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Rad54b
Gene Detail
 Symbol
Name
ID
Rad54b
RAD54 homolog B (S. cerevisiae)
MGI:3605986
Synonyms E130016E03Rik
Feature Type protein coding gene
Genetic Map
Chromosome 4
5.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr4:11558922-11615805 bp, + strand
From VEGA annotation of GRCm38

  56884 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8240  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: DNA repair and recombination protein RAD54B
Gene Tree: Rad54b

Human
homologs
Human Homolog RAD54B, RAD54 homolog B (S. cerevisiae)
NCBI Gene ID 25788
neXtProt AC  NX_O95073, NX_Q9Y620
Human Synonyms  RDH54
Human Chr (Location)  8q22.1; chr8:94371960-94475115 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human RAD54B
Alleles
and
phenotypes
All alleles(142) : Gene trapped(140) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for disruptions in this gene have an increased sensitivity to ionizing radiation and other agents of DNA damage but outherwise have a normal phenotype.
 
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process ATP catabolic process, cellular response to DNA damage stimulus, ...
Function DNA translocase activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (92)    Tissues (92)    Images (19)
Theiler Stages: 22
Assay TypeResults
RNA in situ 92
cDNA source data(7)
External Resources: GEO   ArrayExpress
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000004520 (Evidence)
Ensembl Gene ModelENSMUSG00000078773 (Evidence)
Entrez Gene623474 (Evidence)
Consensus CDS ProjectCCDS17970.1, CCDS57262.1
International Mouse Knockout Project StatusRad54b
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004520 VEGA Gene Model | MGI Sequence Detail 56884 C57BL/6J ±  kb
transcript OTTMUST00000010239 VEGA | MGI Sequence Detail 2870 Not Applicable 
polypeptide OTTMUSP00000004870 VEGA | MGI Sequence Detail 886 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(5)
Polymorphisms SNPs within 2kb(273 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000013679 DNA repair and recombination protein RAD54B
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:2444973

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory