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Spata33 Gene Detail
Summary
  • Symbol
    Spata33
  • Name
    spermatogenesis associated 33
  • Synonyms
    4732415M23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444920
    NCBI Gene: 320869
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:123212832-123222046 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 72.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    82 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444920
protein coding gene Chr8:123212816-123222046 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034246
protein coding gene Chr8:126807677-126819344 (+)
A/J MGP_AJ_G0034226
protein coding gene Chr8:121558490-121568462 (+)
AKR/J MGP_AKRJ_G0034153
protein coding gene Chr8:125091107-125100027 (+)
BALB/cJ MGP_BALBcJ_G0034220
protein coding gene Chr8:121768075-121777677 (+)
C3H/HeJ MGP_C3HHeJ_G0033930
protein coding gene Chr8:125792252-125801840 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034739
protein coding gene Chr8:131054216-131065090 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031681
protein coding gene Chr8:114373292-114389552 (+)
CAST/EiJ MGP_CASTEiJ_G0033258
protein coding gene Chr8:125871241-125882922 (+)
CBA/J MGP_CBAJ_G0033903
protein coding gene Chr8:135859501-135871903 (+)
DBA/2J MGP_DBA2J_G0034060
protein coding gene Chr8:120737097-120746197 (+)
FVB/NJ MGP_FVBNJ_G0034003
protein coding gene Chr8:119901103-119910393 (+)
LP/J MGP_LPJ_G0034149
protein coding gene Chr8:126941045-126951933 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034050
protein coding gene Chr8:138003762-138017898 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034758
protein coding gene Chr8:125301801-125312329 (+)
PWK/PhJ MGP_PWKPhJ_G0032959
protein coding gene Chr8:120570078-120579724 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032799
protein coding gene Chr8:124014258-124029497 (+)
WSB/EiJ MGP_WSBEiJ_G0033374
protein coding gene Chr8:126036494-126047051 (+)



Homology
more
  • Human Ortholog
    SPATA33, spermatogenesis associated 33
  • Vertebrate Orthologs
    6
  • Human Ortholog
    SPATA33, spermatogenesis associated 33
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C16orf55
  • Links
    NCBI Gene ID: 124045
    neXtProt AC: NX_Q96N06
    UniProt: Q96N06

  • Chr Location
    16q24.3; chr16:89657744-89670458 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048478 Ensembl Gene Model | MGI Sequence Detail 9215 C57BL/6J ±  kb
transcript ENSMUST00000212161 Ensembl | MGI Sequence Detail 2941 Not Applicable  
polypeptide ENSMUSP00000148452 Ensembl | MGI Sequence Detail 157 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    8 Sequences
  • InterPro Domains
    IPR027930 Protein of unknown function DUF4609
Molecular
Reagents
less
  • All nucleic 60
    cDNA 60

    Microarray probesets 4
Other
Accession IDs
less
MGI:2142628
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:204303 Chen H, et al., A novel testis-enriched gene Spata33 is expressed during spermatogenesis. PLoS One. 2013;8(7):e67882

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory