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Miat Gene Detail
Summary
  • Symbol
    Miat
  • Name
    myocardial infarction associated transcript (non-protein coding)
  • Synonyms
    A230057G18Rik, gomafu, Rncr2
  • Feature Type
    lincRNA gene
  • IDs
    MGI:2444886
    NCBI Gene: 330166
  • Gene Overview
    MyGene.info: MIAT
Location & Maps
more
  • Sequence Map
    Chr5:112213228-112229395 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      16168 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    MIAT, myocardial infarction associated transcript (non-protein coding)
  • Human Ortholog
    MIAT, myocardial infarction associated transcript (non-protein coding)
    Orthology source: HGNC
  • Synonyms
    C22orf35, GOMAFU, LINC00066, lncRNA-MIAT, NCRNA00066, RNCR2
  • Links
    NCBI Gene ID: 440823

  • Chr Location
    22q12.1; chr22:26657482-26676478 (+)  GRCh38.p2

  • HCOP
    human homology predictions: MIAT
  • Gene Tree
Human Diseases
more
  • Diseases
    1 with human MIAT associations

Human Disease Mouse Models
       Myocardial Infarction, Susceptibility to   OMIM: 608446
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Miat
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043202 VEGA Gene Model | MGI Sequence Detail 16168 C57BL/6J ±  kb
transcript NR_033657 RefSeq | MGI Sequence Detail 8760 C57BL/6  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    58 from dbSNP Build 142
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Other 1

    Microarray probesets 4
References
more
  • Summaries
    All 23
    Developmental Gene Expression 4
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:230219 Ishizuka A, et al., Formation of nuclear bodies by the lncRNA Gomafu-associating proteins Celf3 and SF1. Genes Cells. 2014 Sep;19(9):704-21

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/26/2016
MGI 6.03
The Jackson Laboratory