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Ncoa7
Gene Detail
 Symbol
Name
ID
Ncoa7
nuclear receptor coactivator 7
MGI:2444847
Synonyms 9030406N13Rik
Feature Type protein coding gene
Genetic Map
Chromosome 10
17.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:30645584-30803107 bp, - strand
From Ensembl annotation of GRCm38

  157524 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:65245  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Ncoa7

Human
homologs
Human Homolog NCOA7, nuclear receptor coactivator 7
NCBI Gene ID 135112
neXtProt AC  NX_Q8NI08
Human Synonyms  dJ187J11.3, ERAP140, ESNA1, Nbla00052, Nbla10993, NCOA7-AS, TLDC4
Human Chr (Location)  6q22.32; chr6:125781121-125932030 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(140) : Gene trapped(139) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ncoa7 interacts with 312 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process positive regulation of transcription from RNA polymerase II promoter, regulation of transcription, DNA-templated, ...
Component intracellular, nucleus
Function ligand-dependent nuclear receptor transcription coactivator activity, nuclear hormone receptor binding
External Resources: FuncBase
Expression
cDNA source data(53)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(54) cDNA(53) Other(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000039697 (Evidence)
Entrez Gene211329 (Evidence)
UniGene297903
DFCITC1583115, TC1586617, TC1590092, TC1593479, TC1605084, TC1619463, TC1721169
DoTSDT.101161545, DT.101346042, DT.101358536, DT.40151224, DT.483635, DT.487516, DT.91415869, DT.94342529, DT.97390644, DT.99845335
Consensus CDS ProjectCCDS23765.1, CCDS48530.1
International Mouse Knockout Project StatusNcoa7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039697 Ensembl Gene Model | MGI Sequence Detail 157524 C57BL/6J ±  kb
transcript ENSMUST00000068567 Ensembl | MGI Sequence Detail 5105 Not Applicable 
polypeptide ENSMUSP00000066741 Ensembl | MGI Sequence Detail 943 Not Applicable 

For the selected sequences
All sequences(56) RefSeq(8) UniProt(5)
Polymorphisms SNPs within 2kb(704 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018392 Peptidoglycan-binding lysin domain
InterPro IPR006571 TLDc
Protein Ontology PR:000011046 nuclear receptor coactivator 7
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory