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C130074G19Rik Gene Detail
Summary
  • Symbol
    C130074G19Rik
  • Name
    RIKEN cDNA C130074G19 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444831
    NCBI Gene: 226777
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:184871926-184883036 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 89.22 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    193 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444831
protein coding gene Chr1:184871926-184883218 (-)
129S1/SvImJ MGP_129S1SvImJ_G0016911
protein coding gene Chr1:191571041-191582273 (-)
A/J MGP_AJ_G0016890
protein coding gene Chr1:183752434-183764478 (-)
AKR/J MGP_AKRJ_G0016855
protein coding gene Chr1:189169940-189182252 (-)
BALB/cJ MGP_BALBcJ_G0016848
protein coding gene Chr1:184387333-184399681 (-)
C3H/HeJ MGP_C3HHeJ_G0016672
protein coding gene Chr1:190011204-190023469 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017311
protein coding gene Chr1:197690679-197703217 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015018
protein coding gene Chr1:174747225-174758262 (-)
CAST/EiJ MGP_CASTEiJ_G0016255
protein coding gene Chr1:189430553-189441631 (-)
CBA/J MGP_CBAJ_G0016646
protein coding gene Chr1:205054319-205068544 (-)
DBA/2J MGP_DBA2J_G0016752
protein coding gene Chr1:182510727-182521954 (-)
FVB/NJ MGP_FVBNJ_G0016748
protein coding gene Chr1:180610506-180621788 (-)
LP/J MGP_LPJ_G0016827
protein coding gene Chr1:192727271-192738471 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0016780
protein coding gene Chr1:211965869-211978246 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017348
protein coding gene Chr1:189016834-189028067 (-)
PWK/PhJ MGP_PWKPhJ_G0016042
protein coding gene Chr1:181712160-181723659 (-)
SPRET/EiJ MGP_SPRETEiJ_G0015818
protein coding gene Chr1:187989027-188002093 (-)
WSB/EiJ MGP_WSBEiJ_G0016317
protein coding gene Chr1:189196828-189209176 (-)



Homology
more
  • Human Ortholog
    C1orf115, chromosome 1 open reading frame 115
  • Vertebrate Orthologs
    6
  • Human Ortholog
    C1orf115, chromosome 1 open reading frame 115
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RDD1
  • Links
    NCBI Gene ID: 79762
    neXtProt AC: NX_Q9H7X2
    UniProt: Q9H7X2

  • Chr Location
    1q41; chr1:220690286-220699157 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 226777 NCBI Gene Model | MGI Sequence Detail 11111 C57BL/6J ±  kb
transcript NM_178692 RefSeq | MGI Sequence Detail 2857 C57BL/6  
polypeptide Q8BGN9 UniProt | EBI | MGI Sequence Detail 141 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR031667 Protein of unknown function DUF4710
Molecular
Reagents
less
  • All nucleic 31
    Genomic 2
    cDNA 29

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Gene Ontology 2
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/15/2020
MGI 6.15
The Jackson Laboratory