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Samd5 Gene Detail
Summary
  • Symbol
    Samd5
  • Name
    sterile alpha motif domain containing 5
  • Synonyms
    E130306M17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444815
    NCBI Gene: 320825
Location & Maps
more
  • Sequence Map
    Chr10:9627259-9675208 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      47950 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 3.15 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SAMD5, sterile alpha motif domain containing 5
  • Vertebrate Orthologs
    7
  • Human Ortholog
    SAMD5, sterile alpha motif domain containing 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ875H10.1
  • Links
    NCBI Gene ID: 389432
    neXtProt AC: NX_Q5TGI4

  • Chr Location
    6q24.3; chr6:147508648-147737541 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000037128 VEGA Gene Model | MGI Sequence Detail 47950 C57BL/6J ±  kb
transcript OTTMUST00000095595 VEGA | MGI Sequence Detail 2495 Not Applicable  
polypeptide OTTMUSP00000053343 VEGA | MGI Sequence Detail 173 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    379 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR001660 Sterile alpha motif domain
    IPR013761 Sterile alpha motif/pointed domain
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 4
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory