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Cped1 Gene Detail
Summary
  • Symbol
    Cped1
  • Name
    cadherin-like and PC-esterase domain containing 1
  • Synonyms
    A430107O13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444814
    NCBI Gene: 214642
  • Gene Overview
    MyGene.info: CPED1
Location & Maps
more
  • Sequence Map
    Chr6:21985916-22256404 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      270489 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 8.86 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CPED1, cadherin like and PC-esterase domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CPED1, cadherin like and PC-esterase domain containing 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C7orf58
  • Links
    NCBI Gene ID: 79974
    neXtProt AC: NX_A4D0V7

  • Chr Location
    7q31.31; chr7:120988697-121297444 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 57014
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CPED1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Gene trapped
    1
  • Targeted
    1
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022850 VEGA Gene Model | MGI Sequence Detail 270489 C57BL/6J ±  kb
transcript OTTMUST00000054940 VEGA | MGI Sequence Detail 5690 Not Applicable  
polypeptide OTTMUSP00000026245 VEGA | MGI Sequence Detail 1026 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    2098 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • InterPro Domains
    IPR025883 Cadherin-like beta sandwich domain
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 6
Other
Accession IDs
less
MGI:2141445
References
more
  • Summaries
    All 23
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory