About   Help   FAQ
Prrt3 Gene Detail
Summary
  • Symbol
    Prrt3
  • Name
    proline-rich transmembrane protein 3
  • Synonyms
    B230206N24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444810
    NCBI Gene: 210673
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:113493639-113501931 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 52.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444810
protein coding gene Chr6:113493638-113502082 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031128
protein coding gene Chr6:116016445-116024739 (-)
A/J MGP_AJ_G0031097
protein coding gene Chr6:111570683-111578975 (-)
AKR/J MGP_AKRJ_G0031028
protein coding gene Chr6:114564247-114572544 (-)
BALB/cJ MGP_BALBcJ_G0031108
protein coding gene Chr6:111516743-111525097 (-)
C3H/HeJ MGP_C3HHeJ_G0030600
protein coding gene Chr6:69723889-69732187 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031567
protein coding gene Chr6:119019337-119027625 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028731
protein coding gene Chr6:108598109-108606416 (-)
CAST/EiJ MGP_CASTEiJ_G0030215
protein coding gene Chr6:115012232-115020518 (-)
CBA/J MGP_CBAJ_G0030794
protein coding gene Chr6:123713542-123721750 (-)
DBA/2J MGP_DBA2J_G0030947
protein coding gene Chr6:110650067-110658283 (-)
FVB/NJ MGP_FVBNJ_G0030901
protein coding gene Chr6:109652134-109660424 (-)
LP/J MGP_LPJ_G0031027
protein coding gene Chr6:116050420-116058766 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030935
protein coding gene Chr6:127981383-127989646 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031594
protein coding gene Chr6:114579537-114587816 (-)
PWK/PhJ MGP_PWKPhJ_G0029931
protein coding gene Chr6:109606717-109615047 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029759
protein coding gene Chr6:113397405-113405619 (-)
WSB/EiJ MGP_WSBEiJ_G0030299
protein coding gene Chr6:114954815-114963151 (-)



Homology
more
  • Human Ortholog
    PRRT3, proline rich transmembrane protein 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PRRT3, proline rich transmembrane protein 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 285368
    neXtProt AC: NX_Q5FWE3
    UniProt: Q5FWE3

  • Chr Location
    3p25.3; chr3:9945542-9952415 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045009 Ensembl Gene Model | MGI Sequence Detail 8293 C57BL/6J ±  kb
transcript ENSMUST00000204268 Ensembl | MGI Sequence Detail 3741 Not Applicable  
polypeptide ENSMUSP00000145443 Ensembl | MGI Sequence Detail 972 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 5
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:181586 Hald J, et al., Pancreatic islet and progenitor cell surface markers with cell sorting potential. Diabetologia. 2012 Jan;55(1):154-65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/18/2020
MGI 6.14
The Jackson Laboratory