Zfp827 MGI Mouse Gene Detail - MGI:2444807

Symbol

Zfp827
Name

zinc finger protein 827
Synonyms

2810449M09Rik, D630040G17Rik

Feature Type

protein coding gene
IDs

MGI:2444807
NCBI Gene: 622675
Alliance

gene page
Transcription Start Sites

7 TSS

Sequence Map

Chr8:79028437-79193766 bp, + strand
From Ensembl annotation of GRCm38

View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 8, 37.36 cM
Mapping Data

2 experiments

SNPs within 2kb

791 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2444807	protein coding gene	Chr8:79027486-79193768 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0033809	protein coding gene	Chr8:79680507-79855987 (+)
A/J	MGP_AJ_G0033791	protein coding gene	Chr8:76501990-76669858 (+)
AKR/J	MGP_AKRJ_G0033718	protein coding gene	Chr8:78805058-78974212 (+)
BALB/cJ	MGP_BALBcJ_G0033785	protein coding gene	Chr8:76606131-76772592 (+)
C3H/HeJ	MGP_C3HHeJ_G0033494	protein coding gene	Chr8:79417755-79591544 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0034305	protein coding gene	Chr8:82740249-82922121 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0031246	protein coding gene	Chr8:70588739-70753101 (+)
CAST/EiJ	MGP_CASTEiJ_G0032825	protein coding gene	Chr8:78760598-78926096 (+)
CBA/J	MGP_CBAJ_G0033473	protein coding gene	Chr8:85661218-85837663 (+)
DBA/2J	MGP_DBA2J_G0033626	protein coding gene	Chr8:76193479-76380912 (+)
FVB/NJ	MGP_FVBNJ_G0033571	protein coding gene	Chr8:75184181-75351205 (+)
LP/J	MGP_LPJ_G0033716	protein coding gene	Chr8:79775973-79941946 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033614	protein coding gene	Chr8:88236602-88411695 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034322	protein coding gene	Chr8:78820746-78988153 (+)
PWK/PhJ	MGP_PWKPhJ_G0032528	protein coding gene	Chr8:75479259-75666753 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0032366	protein coding gene	Chr8:77630486-77803980 (+)
WSB/EiJ	MGP_WSBEiJ_G0032938	protein coding gene	Chr8:79148480-79321460 (+)

Human Ortholog

ZNF827, zinc finger protein 827

Vertebrate Orthologs

10

Human Ortholog

ZNF827, zinc finger protein 827
Orthology source: HomoloGene, HGNC
Links

HGNC:27193

NCBI Gene ID: 152485

neXtProt AC: NX_Q17R98

UniProt: Q17R98
Chr Location

4q31.21-q31.22; chr4:145757627-145939008 (-) GRCh38.p7

HomoloGene

Vertebrate Homology Class 45622
1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
HCOP

human homology predictions: ZNF827
Gene Tree

Zfp827

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
7 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	immune system	integument	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	neoplasm	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	vision/eye

Click cells to view annotations.

All Mutations and Alleles

25
Chemically induced (other)

1
Endonuclease-mediated

1
Gene trapped

23
Genomic Mutations

1 involving Zfp827
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

29 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

5
GO References

3

External Resources

FuncBase

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell death	cell differentiation	cell population proliferation	cellular component organization	establishment of localization	homeostatic process	immune system process	lipid metabolic process	nucleic acid-templated transcription	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

631
cDNA Data

58

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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Zfp827 interacts with 515 markers (Mir1a-1, Mir1a-2, Mir1b, ...) View All

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All Sequences

106
RefSeq

43
UniProt

7
CCDS

CCDS52604.1, CCDS80900.1
UniGene

48724

Ensembl

ENSMUSG00000071064 (Evidence)
NCBI Gene

622675

			Length	Strain/Species	Flank
genomic	ENSMUSG00000071064	Ensembl Gene Model \| MGI Sequence Detail	165330	C57BL/6J	± kb
transcript	ENSMUST00000238669	Ensembl \| MGI Sequence Detail	4511	Not Applicable
polypeptide	ENSMUSP00000158613	Ensembl \| MGI Sequence Detail	1346	Not Applicable

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UniProt

7 Sequences
InterPro Domains

IPR036236 Zinc finger C2H2 superfamily

IPR013087 Zinc finger C2H2-type

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All nucleic 60

Genomic 2

cDNA 58

Microarray probesets 4

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MGI:1925647

Summaries

All 31

Gene Ontology 3

Phenotypes 7
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

TSS for Zfp827:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr78123	Chr8:79027969-79027978 (+)	-463 bp
Tssr78124	Chr8:79028178-79028237 (+)	-229 bp
Tssr78125	Chr8:79028253-79028309 (+)	-156 bp
Tssr78126	Chr8:79028317-79028350 (+)	-103 bp
Tssr2612	Chr8:79028351-79028366 (+)	-78 bp
Tssr78127	Chr8:79028565-79028613 (+)	152 bp
Tssr78128	Chr8:79028629-79028654 (+)	205 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support.	last database update 03/31/2020 MGI 6.15