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Zhx3
Gene Detail
Symbol

Name
ID
Zhx3
zinc fingers and homeoboxes 3
MGI:2444772
Synonyms
1810059C13Rik, 4932418O04Rik, 9530010N21Rik, mKIAA0395, Tix1
Feature Type
protein coding gene
Genetic Map
Chromosome 2
80.97 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr2:160748708-160872998 bp, - strand
From VEGA annotation of GRCm38

  124291 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:9000  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: ZHX3
Gene Tree: Zhx3

Human
homologs
ZHX3, zinc fingers and homeoboxes 3
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 23051
neXtProt AC: NX_Q9H4I2

Human Synonyms: TIX1

Human Chr (Location): 20q12; chr20:41178449-41317618 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Zhx3 interacts with 486 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process cell differentiation, negative regulation of transcription, DNA-templated, ...
Component cell cortex, nucleoplasm, ...
Function DNA binding, metal ion binding, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (214)    Tissues (147)    Images (36)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 206
RT-PCR 8
cDNA source data(15)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase zhx3 ; ZFIN zhx3    NEW 
Molecular
reagents
All nucleic(17) cDNA(15) Primer pair(2)
Microarray probesets(9)
Other database
links
VEGA Gene Model OTTMUSG00000001048 (Evidence)
Ensembl Gene Model ENSMUSG00000035877 (Evidence)
Entrez Gene 320799 (Evidence)
DFCI TC1583443, TC1635182, TC1659303
DoTS DT.110744732, DT.110744787, DT.40139479, DT.55236704, DT.94162671, DT.94164646, DT.97408144
NIA Mouse Gene Index U051369
Consensus CDS Project CCDS16997.1
International Mouse Phenotyping Consortium Status Zhx3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000001048 VEGA Gene Model | MGI Sequence Detail 124291 C57BL/6J ±  kb
transcript OTTMUST00000002090 VEGA | MGI Sequence Detail 9563 Not Applicable 
polypeptide OTTMUSP00000061256 VEGA | MGI Sequence Detail 951 Not Applicable 

For the selected sequences
All sequences(61) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(402 from dbSNP Build 137)    SNPs within 2kb including multiple locations(410)
Protein-related
information
ResourceIDDescription
InterPro IPR001356 Homeobox domain
InterPro IPR009057 Homeodomain-like
InterPro IPR024578 Homez homeodomain
InterPro IPR015880 Zinc finger, C2H2-like
Protein Ontology PR:000017664 zinc fingers and homeoboxes protein 3
References
(Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:168654 Chung YC, et al., Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus. Gene Expr Patterns. 2011 Jan-Feb;11(1-2):84-92
All references(42)
Other
accession IDs
MGI:1919294, MGI:1924698

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory