About   Help   FAQ
Zfp780b Gene Detail
Summary
  • Symbol
    Zfp780b
  • Name
    zinc finger protein 780B
  • Synonyms
    B230208L21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444764
    NCBI Gene: 338354
Location & Maps
more
  • Sequence Map
    Chr7:27959135-27979171 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      20037 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 15.97 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ZNF780B, zinc finger protein 780B
  • Vertebrate Orthologs
    5
  • Human Ortholog
    ZNF780B, zinc finger protein 780B
    Orthology source: HomoloGene
  • Synonyms
    ZNF779
  • Links
    NCBI Gene ID: 163131
    neXtProt AC: NX_Q9Y6R6

  • Chr Location
    19q13.2; chr19:40028260-40059027 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000058622 VEGA Gene Model | MGI Sequence Detail 20037 C57BL/6J ±  kb
transcript OTTMUST00000143936 VEGA | MGI Sequence Detail 3940 Not Applicable  
polypeptide OTTMUSP00000075037 VEGA | MGI Sequence Detail 806 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    152 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR001909 Krueppel-associated box
    IPR007087 Zinc finger, C2H2
    IPR015880 Zinc finger, C2H2-like
    IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/23/2016
MGI 6.05
The Jackson Laboratory