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Nipal4
Gene Detail
 Symbol
Name
ID
Nipal4
NIPA-like domain containing 4
MGI:2444671
Synonyms 9530066K23Rik
Feature Type protein coding gene
Genetic Map
Chromosome 11
27.59 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:46148155-46166508 bp, - strand
From VEGA annotation of GRCm38

  18354 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:133769  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Nipal4

Human
homologs
Human Homolog NIPAL4, NIPA-like domain containing 4
NCBI Gene ID 348938
neXtProt AC  NX_Q0D2K0
Human Synonyms  ARCI6, ICHTHYIN, ICHYN
Human Chr (Location)  5q33.3; chr5:157460019-157474722 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human NIPAL4
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Nipal4 interacts with 299 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process ion transport, magnesium ion transport, ...
Component integral component of membrane, membrane
Function magnesium ion transmembrane transporter activity
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000005489 (Evidence)
Ensembl Gene ModelENSMUSG00000020411 (Evidence)
Entrez Gene214112 (Evidence)
UniGene225253
DFCITC1586454
DoTSDT.91564000
NIA Mouse Gene IndexU032697
Consensus CDS ProjectCCDS24572.1
International Mouse Knockout Project StatusNipal4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000005489 VEGA Gene Model | MGI Sequence Detail 18354 C57BL/6J ±  kb
transcript OTTMUST00000012219 VEGA | MGI Sequence Detail 3444 Not Applicable 
polypeptide OTTMUSP00000005636 VEGA | MGI Sequence Detail 406 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(1)
Polymorphisms SNPs within 2kb(203 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008521 Magnesium transporter NIPA
Protein Ontology PR:000008882 magnesium transporter NIPA4
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/23/2014
MGI 5.19
The Jackson Laboratory