About   Help   FAQ
Iffo1 Gene Detail
Summary
  • Symbol
    Iffo1
  • Name
    intermediate filament family orphan 1
  • Synonyms
    4733401N06Rik, A930037G23Rik, Iffo
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444516
    NCBI Gene: 320678
Location & Maps
more
  • Sequence Map
    Chr6:125145241-125161782 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      16542 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    IFFO1, intermediate filament family orphan 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    IFFO1, intermediate filament family orphan 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    HOM-TES-103, IFFO
  • Links
    NCBI Gene ID: 25900
    neXtProt AC: NX_Q0D2I5

  • Chr Location
    12p13.3; chr12:6539528-6556083 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027099 VEGA Gene Model | MGI Sequence Detail 16542 C57BL/6J ±  kb
transcript OTTMUST00000067030 VEGA | MGI Sequence Detail 2833 Not Applicable  
polypeptide OTTMUSP00000033675 VEGA | MGI Sequence Detail 562 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    74 from dbSNP Build 142
Protein
Information
less
  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000032187 intermediate filament family orphan 1
Molecular
Reagents
less
  • All nucleic 42
    cDNA 42

    Microarray probesets 4
Other
Accession IDs
less
MGI:1918072
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
05/17/2016
MGI 6.03
The Jackson Laboratory