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Ccdc15 Gene Detail
Summary
  • Symbol
    Ccdc15
  • Name
    coiled-coil domain containing 15
  • Synonyms
    A630039F14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444488
    NCBI Gene: 245902
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:37275835-37348432 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 20.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    435 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444488
protein coding gene Chr9:37267462-37350218 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034561
protein coding gene Chr9:35244125-35322598 (-)
A/J MGP_AJ_G0034540
protein coding gene Chr9:34316753-34387074 (-)
AKR/J MGP_AKRJ_G0034467
protein coding gene Chr9:35077578-35144351 (-)
BALB/cJ MGP_BALBcJ_G0034531
protein coding gene Chr9:34152948-34226466 (-)
C3H/HeJ MGP_C3HHeJ_G0034244
protein coding gene Chr9:35510321-35581416 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035053
protein coding gene Chr9:36380378-36444874 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031979
protein coding gene Chr9:33433354-33502370 (-)
CAST/EiJ MGP_CASTEiJ_G0033565
protein coding gene Chr9:35204724-35271393 (-)
CBA/J MGP_CBAJ_G0034217
protein coding gene Chr9:37641115-37712590 (-)
DBA/2J MGP_DBA2J_G0034375
protein coding gene Chr9:34368563-34442267 (-)
FVB/NJ MGP_FVBNJ_G0034316
protein coding gene Chr9:33621675-33686844 (-)
LP/J MGP_LPJ_G0034460
protein coding gene Chr9:35458996-35522435 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034362
protein coding gene Chr9:39242121-39324296 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035072
protein coding gene Chr9:35014255-35084344 (-)
PWK/PhJ MGP_PWKPhJ_G0033271
protein coding gene Chr9:34262964-34337016 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033105
protein coding gene Chr9:35217442-35287810 (-)
WSB/EiJ MGP_WSBEiJ_G0033681
protein coding gene Chr9:34821149-34892187 (-)



Homology
more
  • Human Ortholog
    CCDC15, coiled-coil domain containing 15
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC15, coiled-coil domain containing 15
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 80071
    neXtProt AC: NX_Q0P6D6
    UniProt: Q0P6D6

  • Chr Location
    11q24.2; chr11:124954121-125041489 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 28448
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CCDC15
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034303 Ensembl Gene Model | MGI Sequence Detail 72598 C57BL/6J ±  kb
transcript ENSMUST00000037275 Ensembl | MGI Sequence Detail 3525 Not Applicable  
polypeptide ENSMUSP00000036784 Ensembl | MGI Sequence Detail 823 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 1
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory