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Rbms3 Gene Detail
Summary
  • Symbol
    Rbms3
  • Name
    RNA binding motif, single stranded interacting protein
  • Synonyms
    6720477E09Rik, 8430436O14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444477
    NCBI Gene: 207181
Location & Maps
more
  • Sequence Map
    Chr9:116572746-117629913 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      1057168 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 68.78 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    RBMS3, RNA binding motif single stranded interacting protein 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    RBMS3, RNA binding motif single stranded interacting protein 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 27303
    neXtProt AC: NX_Q6XE24

  • Chr Location
    3p24-p23; chr3:29280860-30010395 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036948 VEGA Gene Model | MGI Sequence Detail 1057168 C57BL/6J ±  kb
transcript OTTMUST00000094951 VEGA | MGI Sequence Detail 2126 Not Applicable  
polypeptide OTTMUSP00000052946 VEGA | MGI Sequence Detail 463 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    11429 from dbSNP Build 142
Protein
Information
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  • UniProt
    9 Sequences
  • Protein Ontology
    PR:000013812 RNA-binding motif, single-stranded-interacting protein 3
  • InterPro Domains
    IPR012677 Nucleotide-binding alpha-beta plait domain
    IPR002343 Paraneoplastic encephalomyelitis antigen
    IPR000504 RNA recognition motif domain
Molecular
Reagents
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  • All nucleic 67
    cDNA 66
    Primer pair 1

    Microarray probesets 6
Other
Accession IDs
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MGI:1918756
References
more
  • Summaries
    All 27
    Developmental Gene Expression 3
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:199211 Lu CK, et al., Rbms3, an RNA-binding protein, mediates the expression of Ptf1a by binding to its 3'UTR during mouse pancreas development. DNA Cell Biol. 2012 Jul;31(7):1245-51

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory