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Phf20l1 Gene Detail
Summary
  • Symbol
    Phf20l1
  • Name
    PHD finger protein 20-like 1
  • Synonyms
    CGI-72, E130113K22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444412
    NCBI Gene: 239510
Location & Maps
more
  • Sequence Map
    Chr15:66577572-66645255 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      67684 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    PHF20L1, PHD finger protein 20-like 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    PHF20L1, PHD finger protein 20-like 1
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CGI-72, TDRD20B, URLC1
  • Links
    NCBI Gene ID: 51105
    neXtProt AC: NX_A8MW92

  • Chr Location
    8q24.22; chr8:132775358-132848807 (+)  GRCh38.p2

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    24 phenotype references
  • All Mutations and Alleles
    13
  • Chemically induced (other)
    3
  • Gene trapped
    7
  • Radiation induced
    2
  • Targeted
    1
  • Genomic Mutations
    5 involving Phf20l1
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072501 Ensembl Gene Model | MGI Sequence Detail 67684 C57BL/6J ±  kb
transcript ENSMUST00000048188 Ensembl | MGI Sequence Detail 6670 Not Applicable  
polypeptide ENSMUSP00000035682 Ensembl | MGI Sequence Detail 1013 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    247 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 19
    cDNA 18
    Primer pair 1

    Microarray probesets 8
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 2
    Phenotypes 24
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory