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Galnt11
Gene Detail
 Symbol
Name
ID
Galnt11
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
MGI:2444392
Synonyms A430075I06Rik, E430002F06Rik
Feature Type protein coding gene
Genetic Map
Chromosome 5
12.35 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:25222882-25265918 bp, + strand
From VEGA annotation of GRCm38

  43037 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:11126  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Galnt11

Human
homologs
Human Homolog GALNT11, polypeptide N-acetylgalactosaminyltransferase 11
NCBI Gene ID 63917
neXtProt AC  NX_Q8NCW6
Human Synonyms  GALNACT11
Human Chr (Location)  7q36.1; chr7:152025693-152122342 (+)  GRCh38
Alleles
and
phenotypes
All alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process Notch signaling pathway, protein O-linked glycosylation via threonine
Component Golgi apparatus, integral component of membrane, ...
Function metal ion binding, Notch binding, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (94)    Tissues (94)   
Theiler Stages: 22
Assay TypeResults
RNA in situ 94
cDNA source data(15)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(15) cDNA(15)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000024235 (Evidence)
Ensembl Gene ModelENSMUSG00000038072 (Evidence)
Entrez Gene231050 (Evidence)
NIA Mouse Gene IndexU005374
EC2.4.1.41
Consensus CDS ProjectCCDS19133.1
International Mouse Knockout Project StatusGalnt11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024235 VEGA Gene Model | MGI Sequence Detail 43037 C57BL/6J ±  kb
transcript OTTMUST00000059311 VEGA | MGI Sequence Detail 2552 Not Applicable 
polypeptide OTTMUSP00000028842 VEGA | MGI Sequence Detail 608 Not Applicable 

For the selected sequences
All sequences(43) RefSeq(4) UniProt(2)
Polymorphisms SNPs within 2kb(269 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001173 Glycosyl transferase, family 2
InterPro IPR000772 Ricin B lectin domain
Protein Ontology PR:000007820 polypeptide N-acetylgalactosaminyltransferase 11
References (Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)
Other
accession IDs
MGI:2140948, MGI:2443736

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory