About   Help   FAQ
Cfap46 Gene Detail
Summary
  • Symbol
    Cfap46
  • Name
    cilia and flagella associated protein 46
  • Synonyms
    9330101J02Rik, E030019B06Rik, Ttc40
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444387
    NCBI Gene: 212124
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:139600951-139683817 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 84.57 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    439 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444387
protein coding gene Chr7:139600914-139685326 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033152
protein coding gene Chr7:144633162-144732740 (-)
A/J MGP_AJ_G0033134
protein coding gene Chr7:140547745-140634444 (-)
AKR/J MGP_AKRJ_G0033066
protein coding gene Chr7:144355968-144446047 (-)
BALB/cJ MGP_BALBcJ_G0033135
protein coding gene Chr7:140292677-140377742 (-)
C3H/HeJ MGP_C3HHeJ_G0032849
protein coding gene Chr7:144164936-144258853 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033646
protein coding gene Chr7:149972127-150065432 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030619
protein coding gene Chr7:141680339-141764644 (-)
CAST/EiJ MGP_CASTEiJ_G0032179
protein coding gene Chr7:136455629-136554385 (-)
CBA/J MGP_CBAJ_G0032822
protein coding gene Chr7:155029681-155132777 (-)
DBA/2J MGP_DBA2J_G0032974
protein coding gene Chr7:138503623-138592066 (-)
FVB/NJ MGP_FVBNJ_G0032927
protein coding gene Chr7:138389921-138473667 (-)
LP/J MGP_LPJ_G0033068
protein coding gene Chr7:146183393-146280711 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032959
protein coding gene Chr7:155722026-155815063 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033666
protein coding gene Chr7:143342947-143442797 (-)
PWK/PhJ MGP_PWKPhJ_G0031885
protein coding gene Chr7:131675182-131760564 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031730
protein coding gene Chr7:130182350-130269933 (-)
WSB/EiJ MGP_WSBEiJ_G0032290
protein coding gene Chr7:144262413-144352129 (-)



Homology
more
  • Human Ortholog
    CFAP46, cilia and flagella associated protein 46
  • Human Ortholog
    CFAP46, cilia and flagella associated protein 46
    Orthology source: HGNC
  • Synonyms
    bA288G11.4, bA288G11.5, bB137A17.2, bB137A17.3, C10orf123, C10orf124, C10orf92, C10orf93, TTC40
  • Links
    NCBI Gene ID: 54777
    neXtProt AC: NX_Q8IYW2
    UniProt: Q8IYW2

  • Chr Location
    10q26.3; chr10:132808392-132942585 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049571 Ensembl Gene Model | MGI Sequence Detail 82867 C57BL/6J ±  kb
transcript ENSMUST00000129990 Ensembl | MGI Sequence Detail 8180 Not Applicable  
polypeptide ENSMUSP00000120186 Ensembl | MGI Sequence Detail 2641 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    12 Sequences
  • InterPro Domains
    IPR039586 Cilia- and flagella-associated protein 46
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
Other
Accession IDs
less
MGI:2685016
References
more
  • Summaries
    All 26
    Phenotypes 10
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/15/2019
MGI 6.14
The Jackson Laboratory