About   Help   FAQ
Ccdc169 Gene Detail
Summary
  • Symbol
    Ccdc169
  • Name
    coiled-coil domain containing 169
  • Synonyms
    A730037C10Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444356
    NCBI Gene: 320604
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:55137339-55172935 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 26.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    407 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444356
protein coding gene Chr3:55137339-55175250 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027221
protein coding gene Chr3:53864745-53901029 (+)
A/J MGP_AJ_G0027181
protein coding gene Chr3:52198772-52234375 (+)
AKR/J MGP_AKRJ_G0027151
protein coding gene Chr3:53281368-53316694 (+)
BALB/cJ MGP_BALBcJ_G0027194
protein coding gene Chr3:52050334-52085974 (+)
C3H/HeJ MGP_C3HHeJ_G0026937
protein coding gene Chr3:53482400-53517706 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027640
protein coding gene Chr3:55922288-55961166 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024999
protein coding gene Chr3:48717336-48752985 (+)
CAST/EiJ MGP_CASTEiJ_G0026389
protein coding gene Chr3:53628423-53665859 (+)
CBA/J MGP_CBAJ_G0026913
protein coding gene Chr3:57694487-57732881 (+)
DBA/2J MGP_DBA2J_G0027047
protein coding gene Chr3:51751693-51787470 (+)
FVB/NJ MGP_FVBNJ_G0027015
protein coding gene Chr3:50743752-50779928 (+)
LP/J MGP_LPJ_G0027159
protein coding gene Chr3:54577118-54614770 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027033
protein coding gene Chr3:61816341-61851983 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027698
protein coding gene Chr3:53186334-53223448 (+)
PWK/PhJ MGP_PWKPhJ_G0026121
protein coding gene Chr3:51423545-51459845 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025934
protein coding gene Chr3:52943418-52978518 (+)
WSB/EiJ MGP_WSBEiJ_G0026463
protein coding gene Chr3:53313855-53350300 (+)



Homology
more
  • Human Ortholog
    CCDC169, coiled-coil domain containing 169
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC169, coiled-coil domain containing 169
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C13orf38
  • Links
    NCBI Gene ID: 728591
    neXtProt AC: NX_A6NNP5
    UniProt: A6NNP5

  • Chr Location
    13q13.3; chr13:36227042-36297855 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048655 Ensembl Gene Model | MGI Sequence Detail 35597 C57BL/6J ±  kb
transcript ENSMUST00000061099 Ensembl | MGI Sequence Detail 887 Not Applicable  
polypeptide ENSMUSP00000054771 Ensembl | MGI Sequence Detail 214 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 13

    Microarray probesets 3
References
more
  • Summaries
    All 25
    Diseases 1
    Phenotypes 8
  • Earliest
    J:64276 Lyon MF, et al., Dose-response curves for radiation-induced gene mutations in mouse oocytes and their interpretation. Mutat Res. 1979 Nov;63(1):161-73
  • Latest
    J:157707 Puligilla C, et al., Sox2 induces neuronal formation in the developing mammalian cochlea. J Neurosci. 2010 Jan 13;30(2):714-22

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
09/22/2020
MGI 6.16
The Jackson Laboratory